RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SLC17A6Q9P2U8 582 aa4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 PDE10AQ9Y233 779 aa4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 ZKSCAN5Q9Y2L8 839 aa4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 COA3Q9Y2R0 106 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 NEU2Q9Y3R4 380 aa4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 UTP20O75691 2785 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-208ENST00000455546 KCNE1BA0A087WTH5 132 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TRAV17A0A0B4J275 112 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 A0A1B0GUH1 482 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 OR5H15A6NDH6 313 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF839A8K0R7 811 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 A8MUA0 341 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 FAM227AF5H4B4 570 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CCL21O00585 134 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TXNDC9O14530 226 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 PCDH17O14917 1159 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 OR1F1O43749 312 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 B4GALT2O60909 372 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RDH16O75452 317 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CCNDBP1O95273 360 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RASAL1O95294 804 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NSA2O95478 260 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 GUCA1CO95843 209 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 HPXP02790 462 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CDH1P12830 882 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MLNP12872 115 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ICAM2P13598 275 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 GDNFP39905 211 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 HNF4AP41235 474 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SKIV2L2P42285 1042 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MAGEA3P43357 314 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 XCR1P46094 333 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 IL2P60568 153 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RPS15AP62244 130 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TBPL1P62380 186 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 BTG2P78543 158 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ABATP80404 500 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RELAQ04206 551 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ACTN3Q08043 901 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CDSNQ15517 529 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NSDHLQ15738 373 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TTLL9Q3SXZ7 439 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SFT2D3Q587I9 215 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF766Q5HY98 468 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CATSPEREQ5SY80 951 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CAPN13Q6MZZ7 669 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 AGTRAPQ6RW13 159 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TMEM207Q6UWW9 146 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NCCRP1Q6ZVX7 275 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ANKRD37Q7Z713 158 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MRGPRGQ86SM5 289 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ASPGQ86U10 573 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 PDSS2Q86YH6 399 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 BEST3Q8N1M1 668 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 KIF2BQ8N4N8 673 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 FBXO15Q8NCQ5 510 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF740Q8NDX6 193 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MCOLN3Q8TDD5 553 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 ITLN2Q8WWU7 325 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NR4A3Q92570 626 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 KCNJ9Q92806 393 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TSLPQ969D9 159 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RELTQ969Z4 430 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TM4SF19Q96DZ7 209 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MVB12AQ96EY5 273 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 PBKQ96KB5 322 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SIGLEC12Q96PQ1 595 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 OR4K3Q96R72 315 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TUBB6Q9BUF5 446 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CD244Q9BZW8 370 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SPNS1Q9H2V7 528 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 KLHL31Q9H511 634 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CDCP1Q9H5V8 836 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 KCNK13Q9HB14 408 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 PARVBQ9HBI1 364 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SMURF1Q9HCE7 757 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 XAB2Q9HCS7 855 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 PPANQ9NQ55 473 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 CCDC177Q9NQR7 707 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 FAM114A2Q9NRY5 505 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 C14orf105Q9NVL8 296 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 RIC8BQ9NVN3 520 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TRMT1Q9NXH9 659 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 UTP6Q9NYH9 597 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 COPG2Q9UBF2 871 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 SEC14L3Q9UDX4 400 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 TRMT6Q9UJA5 497 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 IKZF3Q9UKT9 509 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 NAALAD2Q9Y3Q0 740 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 DOPEY1Q5JWR5 2465 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 HCFC1P51610 2035 aa4.41□□□□□ -1.7
GTF3C3-208ENST00000455546 MYOCOSA0A1B0GUC4 107 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A1W2PQ72 361 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ZC3H12DA2A288 527 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ENO4A6NNW6 628 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 NUDT19A8MXV4 375 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 NPIPA5E9PKD4 350 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 H0YIG0 161 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms