RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MLLT1Q03111 559 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 TOP3AQ13472 1001 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 KCNC3Q14003 757 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 HEPACAMQ14CZ8 416 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SHQ1Q6PI26 577 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 FBXO46Q6PJ61 603 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 B3GNT8Q7Z7M8 397 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF547Q8IVP9 402 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SIX5Q8N196 739 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 NDNFQ8TB73 568 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 RAB2BQ8WUD1 216 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 ARSGQ96EG1 525 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CCDC115Q96NT0 180 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 FAM129BQ96TA1 746 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CENPOQ9BU64 300 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 TUBA8Q9NY65 449 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 A0A0J9YVX5 310 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CARNS1A5YM72 827 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 H0YIV9 168 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CYP7B1O75881 506 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SRPRAP08240 638 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 PPP2R1BP30154 601 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CLK3P49761 638 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 BMXP51813 675 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 MLLT10P55197 1068 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CST6Q15828 149 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SERPINA11Q86U17 422 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF761Q86XN6 746 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SLC34A3Q8N130 599 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 DNAJB8Q8NHS0 232 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF514Q96K75 400 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 MAGEB10Q96LZ2 347 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 QRSL1Q9H0R6 528 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 PRSS16Q9NQE7 514 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TEX10Q9NXF1 929 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 DNAJC27Q9NZQ0 273 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CORO2BQ9UQ03 480 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 EIF3FO00303 357 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ADAMDEC1O15204 470 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 HNRNPA1P09651 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SERPINB10P48595 397 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CCT3P49368 545 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 HOXC5Q00444 222 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TARDBPQ13148 414 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TEAD4Q15561 434 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 GGTA1PQ4G0N0 100 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CLEC12AQ5QGZ9 265 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 LRIF1Q5T3J3 769 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 PPP2R2DQ66LE6 453 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 OR56A3Q8NH54 315 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ZFP90Q8TF47 636 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 LRIG1Q96JA1 1093 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 NIPSNAP1Q9BPW8 284 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 EFEMP2O95967 443 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CKMT1AP12532 417 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CXCR2P25025 360 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ACTR1BP42025 376 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ACTR1AP61163 376 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ISL1P61371 349 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 RAE1P78406 368 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CDK3Q00526 305 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 MXD1Q05195 221 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 KLHL17Q6TDP4 642 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 CASP12Q6UXS9 341 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 RBM45Q8IUH3 476 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SVOPQ8N4V2 548 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 WDR36Q8NI36 951 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 LCN9Q8WX39 176 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 NCSTNQ92542 709 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 KAT2AQ92830 837 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TSACCQ96A04 125 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ALPK1Q96QP1 1244 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ZDHHC5Q9C0B5 715 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 MARCH7Q9H992 704 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 MRPS30Q9NP92 439 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 SPATA6Q9NWH7 488 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 TVP23BQ9NYZ1 205 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 IL20RAQ9UHF4 553 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 ENTPD4Q9Y227 616 aa11.43□□□□□ -0.58
SMPD4-213ENST00000454468 RBMX2Q9Y388 322 aaKnown RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 FNDC1Q4ZHG4 1894 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-213ENST00000454468 GRXCR2A6NFK2 248 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PRAMEF10O60809 474 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CCNB2O95067 398 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CH25HO95992 272 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 DUSP7Q16829 419 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 SOWAHCQ53LP3 525 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CBLL1Q75N03 491 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 C6orf120Q7Z4R8 191 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms