RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 IFNA16P05015 189 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 MTHFD2P13995 350 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 CNTFP26441 200 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 EEF1DP29692 281 aaKnown RBP9.99□□□□□ -0.81
DDX39A-203ENST00000454233 SSR2P43308 183 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 CLCN2P51788 898 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 TDGF1P3P51864 188 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 RAP1GDS1P52306 607 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 DDX39BQ13838 428 aaKnown RBP9.99□□□□□ -0.81
DDX39A-203ENST00000454233 NAA30Q147X3 362 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-203ENST00000454233 AP5B1Q2VPB7 878 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 LIPJQ5W064 366 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 GRHL2Q6ISB3 625 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 GFRALQ6UXV0 394 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 ZGRF1Q86YA3 2104 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 MDS2Q8NDY4 140 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 NFAM1Q8NET5 270 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-203ENST00000454233 B3GNT7Q8NFL0 401 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 OR7G3Q8NG95 312 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 REPS1Q96D71 796 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 CMTM7Q96FZ5 175 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 SIGLEC12Q96PQ1 595 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 PAFAH2Q99487 392 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 CCDC77Q9BR77 488 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 ACTR8Q9H981 624 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 LYRM4Q9HD34 91 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 ADAP2Q9NPF8 381 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 PRDM7Q9NQW5 492 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 KLHL1Q9NR64 748 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 LRFN1Q9P244 771 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 SEC14L3Q9UDX4 400 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
DDX39A-203ENST00000454233 A0A087WUV0 522 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TRBV11-1A0A0K0K1C0 115 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 A0A1B0GUH1 482 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 WIPF3A6NGB9 483 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CYSRT1A8MQ03 144 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 POC1B-GALNT4F8VUJ3 575 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CYR61O00622 381 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 LRRTM2O43300 516 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 KLK8O60259 260 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 UGDHO60701 494 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CTNSO60931 367 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SH3BGRLO75368 114 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SP1P08047 785 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 STSP08842 583 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 RBP1P09455 135 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 RNF224P0DH78 156 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 HIST1H1TP22492 207 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 ATP5A1P25705 553 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TPP2P29144 1249 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 ARL1P40616 181 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 PIK3CBP42338 1070 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CYB561P49447 251 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 ST13P50502 369 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 HNRNPFP52597 415 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 KCNK10P57789 538 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 MLF1P58340 268 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 PMP22Q01453 160 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 RBPJQ06330 500 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 STX4Q12846 297 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 GTF2H2Q13888 395 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SERTAD2Q14140 314 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 PCBP2Q15366 365 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■■■■ 27.4
DDX39A-203ENST00000454233 ELAVL1Q15717 326 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TSNAXIP1Q2TAA8 658 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TECRLQ5HYJ1 363 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 UBAP2Q5T6F2 1119 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 DEPDC1Q5TB30 811 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 KHDRBS2Q5VWX1 349 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SPINK14Q6IE38 97 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SLC25A25Q6KCM7 469 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 GTF2H2CQ6P1K8 395 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 METTL2BQ6P1Q9 378 aaKnown RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CLNKQ7Z7G1 428 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TMEM132CQ8N3T6 1108 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 ACOT4Q8N9L9 421 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 APCDD1LQ8NCL9 501 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TMEM52Q8NDY8 209 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 C7orf57Q8NEG2 295 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 HUS1BQ8NHY5 278 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 RGMAQ96B86 450 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TRIM44Q96DX7 344 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-203ENST00000454233 VMP1Q96GC9 406 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SCMH1Q96GD3 660 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 SCYL1Q96KG9 808 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 GPR78Q96P69 363 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CSF3RQ99062 836 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 ALOXE3Q9BYJ1 711 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 OR51B5Q9H339 312 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 IPPKQ9H8X2 491 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 FBXW2Q9UKT8 454 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 TMCO1Q9UM00 188 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 CLCA3PQ9Y6N3 262 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 RELNP78509 3460 aa9.98□□□□□ -0.81
DDX39A-203ENST00000454233 LRRC14BA6NHZ5 514 aa9.97□□□□□ -0.81
DDX39A-203ENST00000454233 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
DDX39A-203ENST00000454233 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms