RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 EDN3P14138 238 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 SERPINB1P30740 379 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 SSR2P43308 183 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 HSD17B7P56937 341 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 OC90Q02509 493 aaPredicted RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 SRSF11Q05519 484 aaKnown RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 GTF2H2Q13888 395 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 RCN2Q14257 317 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 PCBP2Q15366 365 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTNS-204ENST00000452111 OR1C1Q15619 314 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 TMEM35AQ53FP2 167 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 ZNF766Q5HY98 468 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 CHSY3Q70JA7 882 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 RPS19BP1Q86WX3 136 aaKnown RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 ZNF595Q8IYB9 648 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 ACOT4Q8N9L9 421 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 NFAM1Q8NET5 270 aaPredicted RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 HUS1BQ8NHY5 278 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 PHF21BQ96EK2 531 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 CMTM7Q96FZ5 175 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 SIGLEC12Q96PQ1 595 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 PSMG3-AS1Q96PY0 264 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 TBCDQ9BTW9 1192 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 CLDN16Q9Y5I7 305 aa16.78■□□□□ 0.28
CTNS-204ENST00000452111 TNPO3Q9Y5L0 923 aaKnown RBP16.78■□□□□ 0.28
CTNS-204ENST00000452111 TRBV11-1A0A0K0K1C0 115 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 MYOCOSA0A1B0GUC4 107 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 RBP1P09455 135 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 ATP5A1P25705 553 aaKnown RBP16.77■□□□□ 0.28
CTNS-204ENST00000452111 CNTFP26441 200 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
CTNS-204ENST00000452111 CD96P40200 585 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 ARL1P40616 181 aaPredicted RBP16.77■□□□□ 0.28
CTNS-204ENST00000452111 PMP22Q01453 160 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 TSNAXIP1Q2TAA8 658 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 AP5B1Q2VPB7 878 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 KHDRBS2Q5VWX1 349 aaKnown RBP16.77■□□□□ 0.28
CTNS-204ENST00000452111 LIPJQ5W064 366 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 SPINK14Q6IE38 97 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 MAPKAP1Q9BPZ7 522 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 SORBS1Q9BX66 1292 aaKnown RBP16.77■□□□□ 0.28
CTNS-204ENST00000452111 HES7Q9BYE0 225 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 IPPKQ9H8X2 491 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 LYRM4Q9HD34 91 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 DMRT3Q9NQL9 472 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 KLHL1Q9NR64 748 aa16.77■□□□□ 0.28
CTNS-204ENST00000452111 USP9YO00507 2555 aaPredicted RBP16.77■□□□□ 0.27
CTNS-204ENST00000452111 SPTAN1Q13813 2472 aaKnown RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 CPAMD8Q8IZJ3 1885 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 CYSRT1A8MQ03 144 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 IFNA16P05015 189 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 ABHD2P08910 425 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 SNRPAP09012 282 aaKnown RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 HIST1H1TP22492 207 aaPredicted RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 TPP2P29144 1249 aaPredicted RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 RAP1GDS1P52306 607 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 RPS13P62277 151 aaKnown RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 CPSF6Q16630 551 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTNS-204ENST00000452111 ZNF324BQ6AW86 544 aaPredicted RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 LGI4Q8N135 537 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 APCDD1LQ8NCL9 501 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 MDS2Q8NDY4 140 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 B3GNT7Q8NFL0 401 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 THAP3Q8WTV1 239 aaPredicted RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 NR4A3Q92570 626 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 DEFB126Q9BYW3 111 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 NOL11Q9H8H0 719 aaKnown RBP16.76■□□□□ 0.27
CTNS-204ENST00000452111 KCMF1Q9P0J7 381 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 ADGRE2Q9UHX3 823 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 FBXW2Q9UKT8 454 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 SLC5A6Q9Y289 635 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 RNF11Q9Y3C5 154 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 PCDHGA11Q9Y5H2 935 aa16.76■□□□□ 0.27
CTNS-204ENST00000452111 SCN2AQ99250 2005 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 RIPK2O43353 540 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 UGDHO60701 494 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 CTNSO60931 367 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 SMIM24O75264 130 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 SCELO95171 688 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 COL6A2P12110 1019 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 PIK3CBP42338 1070 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 CLCN2P51788 898 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 TDGF1P3P51864 188 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 KCNK10P57789 538 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 PHEXP78562 749 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 ID2Q02363 134 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 STX4Q12846 297 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 TERF2Q15554 542 aa16.75■□□□□ 0.27
CTNS-204ENST00000452111 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms