RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 TMEM214Q6NUQ4 689 aaKnown RBP6.25□□□□□ -1.41
USP46-202ENST00000451218 KANSL1Q7Z3B3 1105 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 SYT12Q8IV01 421 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 PHF10Q8WUB8 498 aaKnown RBP6.25□□□□□ -1.41
USP46-202ENST00000451218 NEURL3Q96EH8 262 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 SIPA1Q96FS4 1042 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 OR2M4Q96R27 311 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 TRIT1Q9H3H1 467 aaKnown RBP6.25□□□□□ -1.41
USP46-202ENST00000451218 NDUFAF4Q9P032 175 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ANAPC2Q9UJX6 822 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ADAM29Q9UKF5 820 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ACAD8Q9UKU7 415 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ARID1BQ8NFD5 2236 aaPredicted RBP6.25□□□□□ -1.41
USP46-202ENST00000451218 ABCA7Q8IZY2 2146 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 VGLL3A8MV65 326 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 CLOCKO15516 846 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 KCNJ13O60928 360 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 CLEC3AO75596 197 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 STATHP02808 62 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 PCNAP12004 261 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 GABRB1P18505 474 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 S100A3P33764 101 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 CHN2P52757 468 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ARSFP54793 590 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 LIM2P55344 173 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 SRP54P61011 504 aaKnown RBP6.25□□□□□ -1.41
USP46-202ENST00000451218 CFHR1Q03591 330 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 GPR18Q14330 331 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 GPR180Q86V85 440 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 IFNEQ86WN2 208 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 LACC1Q8IV20 430 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 MFSD9Q8NBP5 474 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 SMPDL3AQ92484 453 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 CLDN23Q96B33 292 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 MTERF3Q96E29 417 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ZNF285Q96NJ3 590 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 CSF3RQ99062 836 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 TBCDQ9BTW9 1192 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 LRRC61Q9BV99 259 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 DYRK4Q9NR20 520 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 ADGRE2Q9UHX3 823 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 INVSQ9Y283 1065 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 PADI2Q9Y2J8 665 aa6.25□□□□□ -1.41
USP46-202ENST00000451218 LOC105369274A0A096LPK9 316 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 LOC102723532A0A0G2JNH3 316 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 RFXANKO14593 260 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TPST2O60704 377 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PABPC4LP0CB38 370 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 PCMT1P22061 227 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 ARFIP1P53367 373 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PGS1Q32NB8 556 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 GTF2IRD2BQ6EKJ0 949 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TMEM154Q6P9G4 183 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 GTF2IRD2Q86UP8 949 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 OR4N4Q8N0Y3 316 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 HORMAD2Q8N7B1 307 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PNPT1Q8TCS8 783 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 PYURFQ96I23 114 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 GLIPR2Q9H4G4 154 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SMURF2Q9HAU4 748 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 MAN2C1Q9NTJ4 1040 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 KCNE3Q9Y6H6 103 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TRIOBPQ9H2D6 2365 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 LY6G6EA0A0G2JKS1 128 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SAC3D1A6NKF1 404 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 NDUFS4O43181 175 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PROM1O43490 865 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 DNTTP04053 509 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 THY1P04216 161 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 NELFEP18615 380 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 PTGER1P34995 402 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 CLK3P49761 638 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 CASP9P55211 416 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 MERTKQ12866 999 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PPP1R8Q12972 351 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 DDX39BQ13838 428 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 IMPG1Q17R60 797 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 C18orf63Q68DL7 685 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 Q6ZSR6 202 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 Q7L0L9 218 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 MAML2Q8IZL2 1156 aaPredicted RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 ZCCHC7Q8N3Z6 543 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 AMDHD1Q96NU7 426 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 MVB12BQ9H7P6 319 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 AASDHPPTQ9NRN7 309 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TDRKHQ9Y2W6 561 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 U3KQA8 63 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 B4GAT1O43505 415 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 NOBOXO60393 691 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TNFRSF1BP20333 461 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PTX3P26022 381 aaPredicted RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 KDELR2P33947 212 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 CCR8P51685 355 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 ISL1P61371 349 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 GRSF1Q12849 480 aaKnown RBP eCLIP6.24□□□□□ -1.41
USP46-202ENST00000451218 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 EIF3MQ7L2H7 374 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 PATL1Q86TB9 770 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 SATL1Q86VE3 508 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms