RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TRPS1Q9UHF7 1281 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 B3GNT3Q9Y2A9 372 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 ARL2BPQ9Y2Y0 163 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 RAP2CQ9Y3L5 183 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 CSAG2Q9Y5P2 127 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 SCN2AQ99250 2005 aa16.1■□□□□ 0.17
PRPF40A-204ENST00000450303 SPENQ96T58 3664 aaKnown RBP16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 HECTD1Q9ULT8 2610 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 KCNE1BA0A087WTH5 132 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 CCT8L1PA6NM43 557 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 SNX3O60493 162 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 KLHL41O60662 606 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 SNNO75324 88 aaPredicted RBP16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 HPP00738 406 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 IL1RNP18510 177 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 HMOX2P30519 316 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 EFNA3P52797 238 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 FAM53BQ14153 422 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 DOC2AQ14183 400 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 GGTA1PQ4G0N0 100 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 CATSPEREQ5SY80 951 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 GRHL2Q6ISB3 625 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 IGFL3Q6UXB1 125 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 CRLF3Q8IUI8 442 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 ZC3H7AQ8IWR0 971 aaKnown RBP16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 GBP7Q8N8V2 638 aaPredicted RBP16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 L3MBTL4Q8NA19 623 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 OR4F6Q8NGB9 312 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 OR52B6Q8NGF0 335 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 TM9SF4Q92544 642 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 WDR34Q96EX3 536 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 VPS50Q96JG6 964 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 LHPPQ9H008 270 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 MKKSQ9NPJ1 570 aaPredicted RBP16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 MKL2Q9ULH7 1088 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 PCDHGA11Q9Y5H2 935 aa16.09■□□□□ 0.17
PRPF40A-204ENST00000450303 NSG1A0A0A6YYJ2 146 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SGK494L7N484 410 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 ITM2AO43736 263 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 LYPLA1O75608 230 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 WFS1O76024 890 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 OR4F21O95013 312 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 CHEK2O96017 543 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 CHRNGP07510 517 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 COX6A1P12074 109 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 EPORP19235 508 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 PHEXP78562 749 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 TRAF3Q13114 568 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SLBPQ14493 270 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 AGAP7PQ5VUJ5 663 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 MED27Q6P2C8 311 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 LINC00696Q6ZRV3 163 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 ASPGQ86U10 573 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 CLYBLQ8N0X4 340 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 MFSD9Q8NBP5 474 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 CAMKVQ8NCB2 501 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 GALNT11Q8NCW6 608 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 OR4K1Q8NGD4 311 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 METTL6Q8TCB7 284 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SLC13A3Q8WWT9 602 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SNRNP40Q96DI7 357 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 FAR2Q96K12 515 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 C7orf26Q96N11 449 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 AGAP4Q96P64 663 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SLC29A3Q9BZD2 475 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SHCBP1LQ9BZQ2 653 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 NT5DC2Q9H857 520 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 PFDN4Q9NQP4 134 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 C14orf105Q9NVL8 296 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 HCN3Q9P1Z3 774 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 SNX6Q9UNH7 406 aa16.08■□□□□ 0.16
PRPF40A-204ENST00000450303 CNTRLQ7Z7A1 2325 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 RP1L1Q8IWN7 2480 aaPredicted RBP16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 TRBC2A0A5B9 178 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 OR2W5A6NFC9 320 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 CYSRT1A8MQ03 144 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 SLCO1B7G3V0H7 640 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 H0YHG0 523 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 AZIN1O14977 448 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 OR1F1O43749 312 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 KLHL18O94889 574 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 KRT6AP02538 564 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 KRT6BP04259 564 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 SERPIND1P05546 499 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 CELA2AP08217 269 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 FGF4P08620 206 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 UROSP10746 265 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 KRT6CP48668 564 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 RPL14P50914 215 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 HK2P52789 917 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 REEP5Q00765 189 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 OCRLQ01968 901 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 E2F2Q14209 437 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 C10orf62Q5T681 223 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms