RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ITGA2P17301 1181 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 IGFBP5P24593 272 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 SOX3P41225 446 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 ARHGAP25P42331 645 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 DNASE1L1P49184 302 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 CDKN1CP49918 316 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 CRYZQ08257 329 aaKnown RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 LOXL1Q08397 574 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 HSPA14Q0VDF9 509 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 TBL3Q12788 808 aaKnown RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 RCAN2Q14206 197 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 BEX5Q5H9J7 111 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 RNF187Q5TA31 235 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 MEI1Q5TIA1 1274 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 ZNF704Q6ZNC4 412 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 LRRC25Q8N386 305 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 RASGEF1CQ8N431 466 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 PLD5Q8N7P1 536 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 ARIH2OSQ8N7S6 290 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 MAGEC3Q8TD91 643 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 UCN3Q969E3 161 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 TBC1D20Q96BZ9 403 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 VMP1Q96GC9 406 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 PEX11GQ96HA9 241 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 OXNAD1Q96HP4 312 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 FCRL5Q96RD9 977 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 RHNO1Q9BSD3 238 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 SYT11Q9BT88 431 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 ACAT2Q9BWD1 397 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 TSSK1BQ9BXA7 367 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 SLC6A15Q9H2J7 730 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 TUBA8Q9NY65 449 aaPredicted RBP7.21□□□□□ -1.26
LINC01961-201ENST00000449954 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 ATG4BQ9Y4P1 393 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 HEATR5AQ86XA9 2040 aa7.21□□□□□ -1.26
LINC01961-201ENST00000449954 HEATR5BQ9P2D3 2071 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 TCRBV16S1A1N1A0A5B0 115 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 ZNF487B1APH4 448 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 GPC4O75487 556 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 ZFAND5O76080 213 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 FTLP02792 175 aaPredicted RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 APOA4P06727 396 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 GZMAP12544 262 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 EEF1GP26641 437 aaKnown RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 RPA3P35244 121 aaPredicted RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 GJC1P36383 396 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 SSR1P43307 286 aaKnown RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 KLK7P49862 253 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 CSE1LP55060 971 aaKnown RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 SKP1P63208 163 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 KCNJ2P63252 427 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 ACTG1P63261 375 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 FAM120AOSQ5T036 256 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 FAM182AQ5T1J6 154 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 FAM166AQ6J272 317 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 ABHD17CQ6PCB6 329 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 SCIMPQ6UWF3 145 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 NXPE4Q6UWF7 544 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 SYDE1Q6ZW31 735 aaPredicted RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 VRK3Q8IV63 474 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 MCUQ8NE86 351 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 GSDMBQ8TAX9 411 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 WDR89Q96FK6 387 aaPredicted RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 HS6ST2Q96MM7 605 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 PTCHD1Q96NR3 888 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 RNF157Q96PX1 679 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 RASL10BQ96S79 203 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 TIMP4Q99727 224 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 TM9SF2Q99805 663 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 EBNA1BP2Q99848 306 aaKnown RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 ACSS3Q9H6R3 686 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 SH2D2AQ9NP31 389 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 MYO1AQ9UBC5 1043 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 MYOTQ9UBF9 498 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 PPIEQ9UNP9 301 aaKnown RBP7.2□□□□□ -1.26
LINC01961-201ENST00000449954 PRSS21Q9Y6M0 314 aa7.2□□□□□ -1.26
LINC01961-201ENST00000449954 IGKV3D-11A0A0A0MRZ8 115 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 A0A0A6YYJ9 748 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.19□□□□□ -1.26
LINC01961-201ENST00000449954 SLCO1B7G3V0H7 640 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 B4GALT2O60909 372 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 MYO1DO94832 1006 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 C1orf105O95561 183 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 IGHV4-39P01824 125 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 ERGP11308 486 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 ZFXP17010 805 aaPredicted RBP7.19□□□□□ -1.26
LINC01961-201ENST00000449954 CCR7P32248 378 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 CD79BP40259 229 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 TRPC1P48995 793 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 RPS15AP62244 130 aaKnown RBP7.19□□□□□ -1.26
LINC01961-201ENST00000449954 ABATP80404 500 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 PRDX1Q06830 199 aaKnown RBP7.19□□□□□ -1.26
LINC01961-201ENST00000449954 FOXF2Q12947 444 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 DUSP8Q13202 625 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 GAB1Q13480 694 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 TMED2Q15363 201 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 ICE2Q659A1 982 aa7.19□□□□□ -1.26
LINC01961-201ENST00000449954 SLC9A4Q6AI14 798 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms