RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RAB38P57729 211 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 HERVK_113P63132 956 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 PCOLCEQ15113 449 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 RASA2Q15283 850 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 ABHD17CQ6PCB6 329 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 TMEM205Q6UW68 189 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 CHSY3Q70JA7 882 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 RPS27LQ71UM5 84 aaKnown RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 SLC22A9Q8IVM8 553 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 KBTBD2Q8IY47 623 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 CYP4X1Q8N118 509 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 C4orf33Q8N1A6 199 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 RNF175Q8N4F7 328 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 L3MBTL4Q8NA19 623 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 FAM47BQ8NA70 645 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 ZNF483Q8TF39 744 aaPredicted RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 TMEM237Q96Q45 408 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 SERINC2Q96SA4 455 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 TUBB6Q9BUF5 446 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 ERVK-6Q9BXR3 956 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 LHPPQ9H008 270 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 LANCL2Q9NS86 450 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 DCDC2Q9UHG0 476 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
USP39-206ENST00000448971 RNF11Q9Y3C5 154 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 POLQO75417 2590 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 SVILO95425 2214 aa13.7□□□□□ -0.22
USP39-206ENST00000448971 A0A1W2PQ72 361 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 H0YIV9 168 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 RTCAO00442 366 aaKnown RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 SUPT7LO94864 414 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 KRT4P19013 534 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TSPAN8P19075 237 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 PIK3CBP42338 1070 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 CCT5P48643 541 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 CDH13P55290 713 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 RPS13P62277 151 aaKnown RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 RHAGQ02094 409 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TRAF3Q13114 568 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 RCN2Q14257 317 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 NSDHLQ15738 373 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TMEM35AQ53FP2 167 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 CRB2Q5IJ48 1285 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 QSOX2Q6ZRP7 698 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 ANKRD37Q7Z713 158 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TICAM1Q8IUC6 712 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 OR4F6Q8NGB9 312 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 QRFPRQ96P65 431 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 TBCDQ9BTW9 1192 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 ZNF700Q9H0M5 742 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 ZNF552Q9H707 407 aaPredicted RBP13.69□□□□□ -0.22
USP39-206ENST00000448971 ZBTB26Q9HCK0 441 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 ASF1BQ9NVP2 202 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 SPACA6W5XKT8 324 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
USP39-206ENST00000448971 APCP25054 2843 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 DLX3O60479 287 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 PRMT3O60678 531 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 MYL2P10916 166 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 SOX8P57073 446 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 OR4D2P58180 307 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 AP2B1P63010 937 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 CLCQ05315 142 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 ACTN3Q08043 901 aaPredicted RBP13.68□□□□□ -0.22
USP39-206ENST00000448971 Q0VFX4 171 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 IFT88Q13099 833 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 RUNX2Q13950 521 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 NR6A1Q15406 480 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 AP5B1Q2VPB7 878 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 BTBD16Q32M84 506 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 GGTA1PQ4G0N0 100 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 SFT2D3Q587I9 215 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 ZNF678Q5SXM1 525 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 AGAP7PQ5VUJ5 663 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 PAPD4Q6PIY7 484 aaKnown RBP13.68□□□□□ -0.22
USP39-206ENST00000448971 MILR1Q7Z6M3 343 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 TRPC4APQ8TEL6 797 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 CSF3RQ99062 836 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 LPAR4Q99677 370 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 BARD1Q99728 777 aaKnown RBP13.68□□□□□ -0.22
USP39-206ENST00000448971 NTMT1Q9BV86 223 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms