RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 KIAA0895Q8NCT3 520 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NLGN2Q8NFZ4 835 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 OR6C4Q8NGE1 309 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF597Q96LX8 424 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SCML2Q9UQR0 700 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 MRPS23Q9Y3D9 190 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 MEGF11A6BM72 1044 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 A6NLC8 198 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF780AO75290 641 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TRAPPC6AO75865 159 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF182P17025 639 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 XRCC1P18887 633 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 PEX2P28328 305 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 SPAM1P38567 509 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 EPHA4P54764 986 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 RTP1P59025 263 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 SBK1Q52WX2 424 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 KIAA1614Q5VZ46 1190 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 GJB7Q6PEY0 223 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 RGMAQ96B86 450 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TIMM29Q9BSF4 260 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TLR5O60602 858 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 RFPL3O75679 317 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 BCKDHBP21953 392 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF157P51786 506 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF461Q8TAF7 563 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 HPSE2Q8WWQ2 592 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CMSS1Q9BQ75 279 aaKnown RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 DNAJC18Q9H819 358 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 NCOR1O75376 2440 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 A0A1W2PRB8 838 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 GLSO94925 669 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A6P0DMU7 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A5P0DMU8 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A7P0DMV0 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A8P0DMV1 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A9P0DMV2 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 RAB6AP20340 208 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 GLRA2P23416 452 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TNFSF4P23510 183 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A2Q5DJT8 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A1Q5HYN5 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 REEP3Q6NUK4 255 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 LANCL3Q6ZV70 420 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 USP49Q70CQ1 688 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 ZSWIM9Q86XI8 627 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 LGI4Q8N135 537 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 OR8K5Q8NH50 307 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A3Q8NHU0 189 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 IL4I1Q96RQ9 567 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 TAS2R16Q9NYV7 291 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 KLRF1Q9NZS2 232 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 MSRAQ9UJ68 235 aa8.65□□□□□ -1.03
NIPBL-202ENST00000448238 EEF1E1O43324 174 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PRAMEF2O60811 474 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PTTG1O95997 202 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 KLK3P07288 261 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 NCBP2P52298 156 aaKnown RBP eCLIP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 AQP4P55087 323 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RPS3AP61247 264 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CACNG1Q06432 222 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 FGFBP1Q14512 234 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SDSLQ96GA7 329 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SORCS2Q96PQ0 1159 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 IL12RB2Q99665 862 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 NYAP2Q9P242 653 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 OR2T1O43869 369 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TFP02787 698 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PARP15Q460N3 678 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 C10orf62Q5T681 223 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF571Q7Z3V5 609 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 UNC93AQ86WB7 457 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZBTB2Q8N680 514 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM185AQ8NFB2 350 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CMTM2Q8TAZ6 248 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 FNDC9Q8TBE3 224 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 LRTOMTQ8WZ04 291 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 FAM46BQ96A09 425 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SNX18Q96RF0 628 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RFXAPO00287 272 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TGOLN2O43493 480 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RPP40O75818 363 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CSF2P04141 144 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF43P17038 809 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PBX3P40426 434 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 UBXN2BQ14CS0 331 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SLC13A3Q8WWT9 602 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 Q9N2J8 555 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RXFP3Q9NSD7 469 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CDK13Q14004 1512 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SPTBN1Q01082 2364 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 GRM6O15303 877 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 FOXN1O15353 648 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms