RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MAFIPQ8WZ33 124 aa7.5□□□□□ -1.21
NEDD9-204ENST00000448183 CPNE2Q96FN4 548 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-204ENST00000448183 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
NEDD9-204ENST00000448183 GPR88Q9GZN0 384 aa7.5□□□□□ -1.21
NEDD9-204ENST00000448183 PNO1Q9NRX1 252 aaKnown RBP7.5□□□□□ -1.21
NEDD9-204ENST00000448183 LAMP5Q9UJQ1 280 aa7.5□□□□□ -1.21
NEDD9-204ENST00000448183 NPIPA1Q9UND3 350 aa7.5□□□□□ -1.21
NEDD9-204ENST00000448183 A0A0G2JLL6 359 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 A0A1B0GVI7 797 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 A0A1B0GVT2 93 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 F5H0A9 414 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BLOC1S5-TXNDC5H3BN57 136 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLC33A1O00400 549 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HCKP08631 526 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 STSP08842 583 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PET100P0DJ07 73 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BCKDHAP12694 445 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CDKN1CP49918 316 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 GDI2P50395 445 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SEC13P55735 322 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 OR4D2P58180 307 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 DECR1Q16698 335 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ODF4Q2M2E3 257 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLC35G1Q2M3R5 365 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SPIN3Q5JUX0 258 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 LIPJQ5W064 366 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 GLT8D1Q68CQ7 371 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 LCN8Q6JVE9 175 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 OTOP2Q7RTS6 562 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 METTL25Q8N6Q8 603 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF565Q8N9K5 539 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 KCNN1Q92952 543 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BORCS6Q96GS4 357 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SECISBP2Q96T21 854 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TSNAXQ99598 290 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 DPYSL5Q9BPU6 564 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FOLH1BQ9HBA9 442 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FAIMQ9NVQ4 179 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CFAP20Q9Y6A4 193 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 A0A0U1RQF3 1178 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HCRTO43612 131 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 C8orf89P0DMQ9 161 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HSD17B1P14061 328 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MYF6P23409 242 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HTR2AP28223 471 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 RBMXP38159 391 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CRISP1P54107 249 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PDGFRLQ15198 375 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 EXOC3L2Q2M3D2 409 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CHADLQ6NUI6 762 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MMAAQ8IVH4 418 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FAM86B1Q8N7N1 296 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PLA2G15Q8NCC3 412 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CD300LFQ8TDQ1 290 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 OVCA2Q8WZ82 227 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 OR5P2Q8WZ92 322 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MOAP1Q96BY2 351 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CCDC32Q9BV29 185 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 POTEKPQ9BYX7 375 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLC28A3Q9HAS3 691 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ABI3Q9P2A4 366 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 GRHPRQ9UBQ7 328 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FBXL3Q9UKT7 428 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PCDHB11Q9Y5F2 797 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLIT2O94813 1529 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TTC34A8MYJ7 566 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SOCS2O14508 198 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 LDB2O43679 373 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF821O75541 412 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SOX2P48431 317 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HK3P52790 923 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ACTC1P68032 377 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 ACTA1P68133 377 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MLLT1Q03111 559 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SNTB2Q13425 540 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLC36A3Q495N2 470 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TXNDC8Q6A555 127 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 C22orf39Q6P5X5 142 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BAIAP2L2Q6UXY1 529 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CEP68Q76N32 757 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM151AQ8N4L1 468 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MFSD2AQ8NA29 543 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 OR2T33Q8NG76 320 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FANK1Q8TC84 345 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PHOSPHO1Q8TCT1 267 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MAGIXQ9H6Y5 334 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 RBPJLQ9UBG7 517 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TEX13CA0A0J9YWL9 993 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 A0A1W2PQ45 241 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 A0A1W2PQY0 241 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HTR3EA5X5Y0 456 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PCDH17O14917 1159 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 FANCGO15287 622 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PTTG1O95997 202 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms