RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 H3BN98 237 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 TAF4O00268 1085 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 C8AP07357 584 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 IGFBP1P08833 259 aaPredicted RBP12.34□□□□□ -0.43
SHC1-210ENST00000448116 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 TYRP14679 529 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 HNRNPFP52597 415 aaKnown RBP12.34□□□□□ -0.43
SHC1-210ENST00000448116 SLC7A9P82251 487 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 MADCAM1Q13477 382 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 DUSP7Q16829 419 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 DENND6BQ8NEG7 585 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 OR4C15Q8NGM1 316 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 PIP5K1AQ99755 562 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
SHC1-210ENST00000448116 SPNS1Q9H2V7 528 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 ISPDA4D126 451 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 AP2A2O94973 939 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 APOA1P02647 267 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 IL3P08700 152 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 ZNF30P17039 623 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 NNMTP40261 264 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 PRR23CQ6ZRP0 262 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 SCAIQ8N9R8 606 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 OR56A3Q8NH54 315 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 GEMIN6Q8WXD5 167 aaKnown RBP12.34□□□□□ -0.43
SHC1-210ENST00000448116 RAB8BQ92930 207 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 SP140LQ9H930 580 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 C1GALT1Q9NS00 363 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 TAS2R9Q9NYW1 312 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 DNAJC27Q9NZQ0 273 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 PLAGL1Q9UM63 463 aa12.34□□□□□ -0.43
SHC1-210ENST00000448116 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
SHC1-210ENST00000448116 LOC110117498-PIK3R3F6TDL0 507 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 RTCAO00442 366 aaKnown RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 IFNA14P01570 189 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 NPPBP16860 134 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 POLR2EP19388 210 aaKnown RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 UGT2B15P54855 530 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 LY6G5CQ5SRR4 150 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PNCKQ6P2M8 343 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 SLC34A3Q8N130 599 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 CELF2-AS1Q8N7Q2 184 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 REPS1Q96D71 796 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 TCEAL4Q96EI5 215 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 C5AR2Q9P296 337 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PCDHGB6Q9Y5F9 930 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 SSX4O60224 188 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 GPR37L1O60883 481 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 IFNW1P05000 195 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 ADRA2AP08913 450 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 FURINP09958 794 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 CHMP24386 653 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 AZGP1P25311 298 aaKnown RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 OLR1P78380 273 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 ZNF33BQ06732 778 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PRSS53Q2L4Q9 553 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 RSBN1Q5VWQ0 802 aaPredicted RBP12.33□□□□□ -0.44
SHC1-210ENST00000448116 OXR1Q8N573 874 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 MAPRE3Q9UPY8 281 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.44
SHC1-210ENST00000448116 PIPSLA2A3N6 862 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 OR10H3O60404 316 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DEFA1P59665 94 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DEFA3P59666 94 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DAB2P98082 770 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ZNF45Q02386 682 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 HENMT1Q5T8I9 393 aaKnown RBP12.32□□□□□ -0.44
SHC1-210ENST00000448116 CEACAM20Q6UY09 585 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 BCDIN3DQ7Z5W3 292 aaKnown RBP12.32□□□□□ -0.44
SHC1-210ENST00000448116 C11orf74Q86VG3 221 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 GRAMD2AQ8IUY3 354 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 LACC1Q8IV20 430 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 TMEM151BQ8IW70 566 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 NLNQ9BYT8 704 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ASAH2Q9NR71 780 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms