RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 COX7A2P14406 83 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 RPL3P39023 403 aaKnown RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 GCGRP47871 477 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 LIM2P55344 173 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 C21orf58P58505 322 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 KLC1Q07866 573 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 CYLC2Q14093 348 aaPredicted RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 ZSCAN26Q16670 478 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 NDUFAF5Q5TEU4 345 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 PWWP2BQ6NUJ5 590 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 BLOC1S3Q6QNY0 202 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 R3HCC1LQ7Z5L2 792 aaKnown RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 SNX32Q86XE0 403 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 METTL27Q8N6F8 245 aaPredicted RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 POU5F2Q8N7G0 328 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 OR5T3Q8NGG3 340 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 TESCQ96BS2 214 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 MVB12AQ96EY5 273 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 PRPF18Q99633 342 aaKnown RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 MAPKAP1Q9BPZ7 522 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 REEP4Q9H6H4 257 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 ACTR5Q9H9F9 607 aaPredicted RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 LYRM4Q9HD34 91 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 SLC39A1Q9NY26 324 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 ATG4BQ9Y4P1 393 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 SPACA6W5XKT8 324 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 CNOT1A5YKK6 2376 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 DSCR3O14972 297 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 SCAMP2O15127 329 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 CBX6O95503 412 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 PRDX6P30041 224 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 ALDH9A1P49189 494 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 MC1RQ01726 317 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 RCAN2Q14206 197 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 PGS1Q32NB8 556 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 FAM174BQ3ZCQ3 159 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 NSL1Q96IY1 281 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 TUBB6Q9BUF5 446 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 SLC25A23Q9BV35 468 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 MIEF1Q9NQG6 463 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 MS4A12Q9NXJ0 267 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 KCMF1Q9P0J7 381 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 TAGLN3Q9UI15 199 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CDC14AQ9UNH5 594 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 PCDHB3Q9Y5E6 796 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 A0A1B0GX78 115 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 A0A1W2PR48 441 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 GABRR3A8MPY1 467 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 PROM1O43490 865 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 DNAJB6O75190 326 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 TIAF1O95411 115 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 IL6P05231 212 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 FURINP09958 794 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 DDCP20711 480 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CPN2P22792 545 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 BUD31P41223 144 aaPredicted RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 ZFP36L2P47974 494 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 EIF3IQ13347 325 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 UGT8Q16880 541 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 DPY19L1Q2PZI1 675 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.47■□□□□ 0.55
SGCE-207ENST00000447873 TIGD2Q4W5G0 525 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 SPANXN4Q5MJ08 99 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CPTPQ5TA50 214 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 RHBDD2Q6NTF9 364 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CCDC121Q6ZUS5 278 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 MMP21Q8N119 569 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CA13Q8N1Q1 262 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 OR7A2PQ8NGA2 310 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 MTERF3Q96E29 417 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 SPDL1Q96EA4 605 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 WDR41Q9HAD4 459 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 CLK4Q9HAZ1 481 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 SH3BP4Q9P0V3 963 aa18.47■□□□□ 0.55
SGCE-207ENST00000447873 EXO1Q9UQ84 846 aaKnown RBP18.47■□□□□ 0.55
SGCE-207ENST00000447873 CCDC187A0A096LP49 1063 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 DYTNA2CJ06 578 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 CHST10O43529 356 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 AIFM1O95831 613 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 HBQ1P09105 142 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 JMJD7P0C870 316 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 ESRRAP11474 423 aaPredicted RBP18.46■□□□□ 0.55
SGCE-207ENST00000447873 DRD2P14416 443 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 ITIH1P19827 911 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 TLX1P31314 330 aaPredicted RBP18.46■□□□□ 0.55
SGCE-207ENST00000447873 DGKQP52824 942 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 SRSF11Q05519 484 aaKnown RBP18.46■□□□□ 0.55
SGCE-207ENST00000447873 STX5Q13190 355 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 VPS26BQ4G0F5 336 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 C1orf189Q5VU69 101 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 C18orf63Q68DL7 685 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 ANKRD26P1Q6NSI1 321 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 PRMT9Q6P2P2 845 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 TSPEARQ8WU66 669 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 VPS33AQ96AX1 596 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 PPCDCQ96CD2 204 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 CLIP3Q96DZ5 547 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 ATAD3AQ9NVI7 634 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 HCN3Q9P1Z3 774 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms