RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MTTPP55157 894 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 EXOSC8Q96B26 276 aaKnown RBP23.57■■□□□ 1.36
RFFL-206ENST00000447669 CGREF1Q99674 301 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 LRRN3Q9H3W5 708 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 SPAG4Q9NPE6 437 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 TMEM181Q9P2C4 612 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 USP22Q9UPT9 525 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 NAALAD2Q9Y3Q0 740 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 A0A1W2PS29 197 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 ZSCAN9O15535 394 aaPredicted RBP23.57■■□□□ 1.36
RFFL-206ENST00000447669 RETP07949 1114 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 ABCB1P08183 1280 aaPredicted RBP23.57■■□□□ 1.36
RFFL-206ENST00000447669 SUZ12Q15022 739 aaKnown RBP23.57■■□□□ 1.36
RFFL-206ENST00000447669 ABHD13Q7L211 337 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 ARHGEF39Q8N4T4 335 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 OR6C4Q8NGE1 309 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 RHBDD1Q8TEB9 315 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 KLHL6Q8WZ60 621 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 NDE1Q9NXR1 346 aa23.57■■□□□ 1.36
RFFL-206ENST00000447669 SGK494L7N484 410 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 MAP3K7O43318 606 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PTPN6P29350 595 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PTGER1P34995 402 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 KPNB1Q14974 876 aaKnown RBP23.56■■□□□ 1.36
RFFL-206ENST00000447669 DPY19L1Q2PZI1 675 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 ZNF750Q32MQ0 723 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 TMEM71Q6P5X7 295 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 IKBIPQ70UQ0 350 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 CAMKMTQ7Z624 323 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 ZCCHC7Q8N3Z6 543 aaKnown RBP23.56■■□□□ 1.36
RFFL-206ENST00000447669 OR9A4Q8NGU2 314 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 TMEM125Q96AQ2 219 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PANX1Q96RD7 426 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PRPF18Q99633 342 aaKnown RBP23.56■■□□□ 1.36
RFFL-206ENST00000447669 SLAMF7Q9NQ25 335 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PLCL2Q9UPR0 1127 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 PCDHA9Q9Y5H5 950 aa23.56■■□□□ 1.36
RFFL-206ENST00000447669 EP300Q09472 2414 aaPredicted RBP23.56■■□□□ 1.36
RFFL-206ENST00000447669 RFXANKO14593 260 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 AIFM1O95831 613 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 ARL4DP49703 201 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 HSD11B2P80365 405 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 TGM3Q08188 693 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 HEPACAMQ14CZ8 416 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 PRTGQ2VWP7 1150 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 METTL27Q8N6F8 245 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 ZNF655Q8N720 491 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 N4BP2L2Q92802 583 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 NAT6Q93015 286 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 ITCHQ96J02 903 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 CNDP2Q96KP4 475 aaKnown RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 CSF3RQ99062 836 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 HOPXQ9BPY8 73 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 KCNH6Q9H252 994 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 DNAAF2Q9NVR5 837 aaKnown RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 PRPF19Q9UMS4 504 aaKnown RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 OTOGLQ3ZCN5 2332 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 CFAP54Q96N23 3096 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 ADAMTS20P59510 1910 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 URADA6NGE7 173 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 TMEM150CB9EJG8 249 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 C6orf47O95873 294 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 ZNF806P0C7X5 589 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 MS4A2Q01362 244 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 R3HCC1LQ7Z5L2 792 aaKnown RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 ARHGAP24Q8N264 748 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 C10orf90Q96M02 699 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 PCDHAC1Q9H158 963 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 MMADHCQ9H3L0 296 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 RMND5AQ9H871 391 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 KCMF1Q9P0J7 381 aa23.55■■□□□ 1.36
RFFL-206ENST00000447669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.55■■□□□ 1.36
RFFL-206ENST00000447669 A0A0A6YYC8 382 aaPredicted RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 PRSS51A0A1B0GVH4 220 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 I3L1I5 382 aaPredicted RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 PROM1O43490 865 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 SRPX2O60687 465 aaPredicted RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 ENTPD5O75356 428 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 CPNE6O95741 557 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 NUBP1P53384 320 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 DBX2Q6ZNG2 339 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 IFNEQ86WN2 208 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 C10orf111Q8N326 155 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 STARD8Q92502 1023 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 FAM120CQ9NX05 1096 aaKnown RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 MAN2B2Q9Y2E5 1009 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 SCELO95171 688 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 HOXB9P17482 250 aaPredicted RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 GRK6P43250 576 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 LIM2P55344 173 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 HBA1P69905 142 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 SLC14A1Q13336 389 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 FBXW10Q5XX13 1052 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 ZNF621Q6ZSS3 439 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 FAM47BQ8NA70 645 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 HIPK4Q8NE63 616 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 SLC41A2Q96JW4 573 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 SERINC2Q96SA4 455 aa23.54■■□□□ 1.36
RFFL-206ENST00000447669 BHLHE41Q9C0J9 482 aaPredicted RBP23.54■■□□□ 1.36
RFFL-206ENST00000447669 POMPQ9Y244 141 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms