RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 KLC1Q07866 573 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 MFAP5Q13361 173 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 HIST2H2ACQ16777 129 aaPredicted RBP11.71□□□□□ -0.53
SSR4-205ENST00000447375 HIST2H2AA3Q6FI13 130 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 NIPAL1Q6NVV3 410 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 ISLR2Q6UXK2 745 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 ABHD13Q7L211 337 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.71□□□□□ -0.53
SSR4-205ENST00000447375 LAS2Q8IYD9 372 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 MREGQ8N565 214 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 PTGR2Q8N8N7 351 aaPredicted RBP11.71□□□□□ -0.53
SSR4-205ENST00000447375 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 ZCCHC10Q8TBK6 192 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 ADAMTS18Q8TE60 1221 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 EPS8L3Q8TE67 593 aaKnown RBP11.71□□□□□ -0.53
SSR4-205ENST00000447375 UBE2E3Q969T4 207 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 MIEF2Q96C03 454 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 PHF21BQ96EK2 531 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 AICDAQ9GZX7 198 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 KLHL31Q9H511 634 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.53
SSR4-205ENST00000447375 CLK4Q9HAZ1 481 aaKnown RBP11.71□□□□□ -0.53
SSR4-205ENST00000447375 NAALAD2Q9Y3Q0 740 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.53
SSR4-205ENST00000447375 SCN2AQ99250 2005 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 URADA6NGE7 173 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ANKDD1BA6NHY2 528 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 FOXO6A8MYZ6 492 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 UGDHO60701 494 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 BMP10O95393 424 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 TBX6O95947 436 aaPredicted RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 ZNF888P0CJ79 500 aaPredicted RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 MST1P26927 711 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 EEF1DP29692 281 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 HNF4AP41235 474 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 SKP1P63208 163 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ARG2P78540 354 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 MAT1AQ00266 395 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 SRSF11Q05519 484 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 LTBQ06643 244 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 GTF2H2Q13888 395 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 INAQ16352 499 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 C3AR1Q16581 482 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 SYT16Q17RD7 645 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 DEFB134Q4QY38 66 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 LIPJQ5W064 366 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 GRHL2Q6ISB3 625 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 GTF2H2CQ6P1K8 395 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 SHISA6Q6ZSJ9 500 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 GOLGA7Q7Z5G4 137 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ZC3H7AQ8IWR0 971 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 ACBD4Q8NC06 268 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 THOC3Q96J01 351 aaKnown RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 FOXC2Q99958 501 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 YIPF2Q9BWQ6 316 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 C1QTNF3Q9BXJ4 246 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ROPN1BQ9BZX4 212 aaPredicted RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 IPPKQ9H8X2 491 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 ROPN1Q9HAT0 212 aaPredicted RBP11.7□□□□□ -0.54
SSR4-205ENST00000447375 C14orf105Q9NVL8 296 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 C3orf18Q9UK00 162 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 PCTPQ9UKL6 214 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 HS3ST3B1Q9Y662 390 aa11.7□□□□□ -0.54
SSR4-205ENST00000447375 TLDC2A0PJX2 215 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 SMIM23A6NLE4 172 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 A8MT66 165 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 IDSB3KWA1 339 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 SOCS6O14544 535 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 OR7A17O14581 309 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 FFAR3O14843 346 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 GPR42O15529 346 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 DLX3O60479 287 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 SLC19A2O60779 497 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 DNAJB6O75190 326 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 RDH16O75452 317 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 CRYABP02511 175 aaKnown RBP11.69□□□□□ -0.54
SSR4-205ENST00000447375 FOSL1P15407 271 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 KRT15P19012 456 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 TAC1P20366 129 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 IL10P22301 178 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 HNRNPH1P31943 449 aaKnown RBP11.69□□□□□ -0.54
SSR4-205ENST00000447375 HPDP32754 393 aaPredicted RBP11.69□□□□□ -0.54
SSR4-205ENST00000447375 EMP2P54851 167 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 RAB8AP61006 207 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 FOXD4Q12950 439 aaPredicted RBP11.69□□□□□ -0.54
SSR4-205ENST00000447375 TOR1AIP1Q5JTV8 583 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 ADNP2Q6IQ32 1131 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 MED27Q6P2C8 311 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 KIRREL2Q6UWL6 708 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 PRSS58Q8IYP2 241 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 SHISA5Q8N114 240 aa11.69□□□□□ -0.54
SSR4-205ENST00000447375 RIBC1Q8N443 379 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms