RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 RPA4Q13156 261 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 KEAP1Q14145 624 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 LYPLAL1Q5VWZ2 237 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 CRTC1Q6UUV9 634 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 CMTM8Q8IZV2 173 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 SLC37A3Q8NCC5 494 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 C11orf54Q9H0W9 315 aaPredicted RBP12.17□□□□□ -0.46
UBP1-204ENST00000447368 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
UBP1-204ENST00000447368 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 E7EQ34 232 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 TMEM189-UBE2V1I3L0A0 370 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 PCDH7O60245 1069 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 ALDH9A1P49189 494 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 SNRPD1P62314 119 aaKnown RBP12.17□□□□□ -0.46
UBP1-204ENST00000447368 GALEQ14376 348 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 TATDN3Q17R31 274 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 COMMD7Q86VX2 200 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 GPR65Q8IYL9 337 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 NFKBIDQ8NI38 313 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 TM9SF2Q99805 663 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 SMURF1Q9HCE7 757 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 ACOXLQ9NUZ1 547 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 RLIMQ9NVW2 624 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
UBP1-204ENST00000447368 CAPN5O15484 640 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 PDE9AO76083 593 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 SOX14O95416 240 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 PTHP01270 115 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ADORA3P0DMS8 318 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 EPORP19235 508 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 GABRR2P28476 465 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 MEF2AQ02078 507 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 PPIGQ13427 754 aaKnown RBP eCLIP12.16□□□□□ -0.464e-7■□□□□ 8.7
UBP1-204ENST00000447368 DOC2AQ14183 400 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ZC3H12BQ5HYM0 836 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 LRRC70Q7Z2Q7 622 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ASB15Q8WXK1 588 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 TMEM169Q96HH4 297 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 RACGAP1Q9H0H5 632 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 RUVBL1Q9Y265 456 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 GRIP1Q9Y3R0 1128 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 LEUTXA8MZ59 168 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 C5orf58C9J3I9 102 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 J3KTA2 159 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 PLATP00750 562 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 TGFB1P01137 390 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ZDHHC11BP0C7U3 371 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 AOAHP28039 575 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CD70P32970 193 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 PIK3CBP42338 1070 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 BDKRB1P46663 353 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 C2orf80Q0P641 193 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 EXOC3L2Q2M3D2 409 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CST9Q5W186 159 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CAPN13Q6MZZ7 669 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 MACC1Q6ZN28 852 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CALHM3Q86XJ0 350 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 DCAF4L2Q8NA75 395 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 OR9Q1Q8NGQ5 310 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 RIPOR3Q96MK2 946 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 OR2A14Q96R47 310 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 PKP4Q99569 1192 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 MSL3P1P0C860 447 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 HOXA9P31269 272 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 SOX9P48436 509 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 PUS10Q3MIT2 529 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 BHLHB9Q6PI77 547 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 Q6ZVL8 140 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ASB18Q6ZVZ8 466 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 THOC6Q86W42 341 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 OR2AP1Q8NGE2 309 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 ZNF431Q8TF32 576 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 RNF121Q9H920 327 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 GALNT9Q9HCQ5 603 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
UBP1-204ENST00000447368 NDRG4Q9ULP0 352 aaKnown RBP12.16□□□□□ -0.46
UBP1-204ENST00000447368 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
UBP1-204ENST00000447368 GFRA2O00451 464 aa12.15□□□□□ -0.46
UBP1-204ENST00000447368 GAPDHSO14556 408 aaPredicted RBP12.15□□□□□ -0.46
UBP1-204ENST00000447368 ADAMDEC1O15204 470 aa12.15□□□□□ -0.46
UBP1-204ENST00000447368 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
UBP1-204ENST00000447368 C8GP07360 202 aa12.15□□□□□ -0.46
UBP1-204ENST00000447368 CD9P21926 228 aa12.15□□□□□ -0.46
UBP1-204ENST00000447368 FEN1P39748 380 aaKnown RBP12.15□□□□□ -0.46
UBP1-204ENST00000447368 LMAN2Q12907 356 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms