RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 SRFBP1Q8NEF9 429 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 METTL6Q8TCB7 284 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 AGAP11Q8TF27 550 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 NACC2Q96BF6 587 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 THOC3Q96J01 351 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 MAPKAP1Q9BPZ7 522 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 NPLQ9BXD5 320 aaPredicted RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 ROGDIQ9GZN7 287 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 NECTIN3Q9NQS3 549 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 RIC8BQ9NVN3 520 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 C19orf25Q9UFG5 118 aaPredicted RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 TUBD1Q9UJT1 453 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 DAPP1Q9UN19 280 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 TSC22D4Q9Y3Q8 395 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 TIMM22Q9Y584 194 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 LOC102723996A0A087X1L8 192 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 MYOCOSA0A1B0GUC4 107 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 A8MUA0 341 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 FOXE1O00358 373 aaPredicted RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 MANBAO00462 879 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 TYROBPO43914 113 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 EEDO75530 441 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 PRKRAO75569 313 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 MYZAPP0CAP1 466 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SFTPCP11686 197 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 FOXA1P55317 472 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 PKNOX1P55347 436 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 OR4D2P58180 307 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 DNAJB13P59910 316 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ID2Q02363 134 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SLAMF1Q13291 335 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 CUL3Q13618 768 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SCIMPQ6UWF3 145 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 LRIG3Q6UXM1 1119 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 QSOX2Q6ZRP7 698 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ZCCHC23Q6ZST2 131 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ASB18Q6ZVZ8 466 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 CPEB2Q7Z5Q1 589 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 EXOC3L1Q86VI1 746 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 NUDT13Q86X67 352 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ZNF843Q8N446 348 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ADAMTS18Q8TE60 1221 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SERPINI1Q99574 410 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ZNF717Q9BY31 904 aaPredicted RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 MRPL1Q9BYD6 325 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 SLC29A3Q9BZD2 475 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ZNF700Q9H0M5 742 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 PRDM9Q9NQV7 894 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 PRTFDC1Q9NRG1 225 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SENP1Q9P0U3 644 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 MRPS33Q9Y291 106 aaKnown RBP11.2□□□□□ -0.62
RFC4-208ENST00000447345 FIS1Q9Y3D6 152 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 SPACA6W5XKT8 324 aa11.2□□□□□ -0.62
RFC4-208ENST00000447345 ARHGAP10A1A4S6 786 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 WDR91A4D1P6 747 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 TMPRSS11DO60235 418 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 CEACAM4O75871 244 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 SCELO95171 688 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 ESRRBO95718 433 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KRT6AP02538 564 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KRT6BP04259 564 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 ENO1P06733 434 aaKnown RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 CYC1P08574 325 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 CHN1P15882 459 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 CPN2P22792 545 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 PPP2R1BP30154 601 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 BSGP35613 385 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KRT6CP48668 564 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 CASP8Q14790 479 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 MYBPC3Q14896 1274 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 PAPD4Q6PIY7 484 aaKnown RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 CYP20A1Q6UW02 462 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KBTBD2Q8IY47 623 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 SIRT6Q8N6T7 355 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 BRIX1Q8TDN6 353 aaKnown RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 GATA5Q9BWX5 397 aaPredicted RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 LHPPQ9H008 270 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 LYRM4Q9HD34 91 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 TNFRSF12AQ9NP84 129 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 KCMF1Q9P0J7 381 aa11.19□□□□□ -0.62
RFC4-208ENST00000447345 PCDHGA9Q9Y5G4 932 aaKnown RBP11.19□□□□□ -0.62
RFC4-208ENST00000447345 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
RFC4-208ENST00000447345 IGKV3D-11A0A0A0MRZ8 115 aa11.18□□□□□ -0.62
RFC4-208ENST00000447345 A0A0A6YYD5 115 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms