RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CCDC28BQ9BUN5 200 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 NPLQ9BXD5 320 aaPredicted RBP17■□□□□ 0.31
TRAPPC4-203ENST00000447216 LYARQ9NX58 379 aaKnown RBP17■□□□□ 0.31
TRAPPC4-203ENST00000447216 KCMF1Q9P0J7 381 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 TRPC4Q9UBN4 977 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 TMED5Q9Y3A6 229 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 MSRB2Q9Y3D2 182 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 ATG4BQ9Y4P1 393 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 ASB4Q9Y574 426 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 FAM227AF5H4B4 570 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 PRKRAO75569 313 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 DXOO77932 396 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 KLK3P07288 261 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 ADRB1P08588 477 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 AGXTP21549 392 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 RAB38P57729 211 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 FOXL2P58012 376 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 TAS2R50P59544 299 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 ERV3-1Q14264 604 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 MLIPQ5VWP3 458 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 OGFOD2Q6N063 350 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 NIPAL1Q6NVV3 410 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 FAM198BQ6UWH4 519 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 SPATA19Q7Z5L4 167 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 GPR180Q86V85 440 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 TMEM151BQ8IW70 566 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 FAM47BQ8NA70 645 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 OR51Q1Q8NH59 317 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 UCN3Q969E3 161 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 TM4SF18Q96CE8 201 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 EGLN2Q96KS0 407 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 CATSPER2Q96P56 530 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 TSSK3Q96PN8 268 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 LYRM4Q9HD34 91 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 TEX10Q9NXF1 929 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 CTSFQ9UBX1 484 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 DAPP1Q9UN19 280 aa16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 EIF3LQ9Y262 564 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-203ENST00000447216 WDFY3Q8IZQ1 3526 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 A0A1W2PR48 441 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 SRRM3A6NNA2 597 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 SNX3O60493 162 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 RAD1O60671 282 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 CNOT3O75175 753 aaKnown RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 JRKO75564 520 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 IL3P08700 152 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 G6PDP11413 515 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 RNH1P13489 461 aaKnown RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 CPN2P22792 545 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 MAPK1P28482 360 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 XCR1P46094 333 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 HNRNPFP52597 415 aaKnown RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 NME5P56597 212 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 MC1RQ01726 317 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 ZNF763Q0D2J5 394 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 MAD2L1Q13257 205 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 SMU1Q2TAY7 513 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 C18orf63Q68DL7 685 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 PRSS58Q8IYP2 241 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 TMEM52Q8NDY8 209 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 CT55Q8WUE5 264 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 THSD1Q9NS62 852 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 AIG1Q9NVV5 245 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 NOP53Q9NZM5 478 aaKnown RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 PADI1Q9ULC6 663 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 MAP4K5Q9Y4K4 846 aa16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 NUP214P35658 2090 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC4-203ENST00000447216 CACNA1AO00555 2505 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 STMND1H3BQB6 276 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 UBDO15205 165 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 AKAP10O43572 662 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 LRATO95237 230 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 AIFM1O95831 613 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 ONECUT2O95948 504 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 CCNYL3P0C7X3 344 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 PIM1P11309 404 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 PRPS2P11908 318 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 C2orf80Q0P641 193 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 PTGR1Q14914 329 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 SHISA6Q6ZSJ9 500 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 OVCH1Q7RTY7 1134 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 ZC3H7AQ8IWR0 971 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 NLGN4XQ8N0W4 816 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 NLGN4YQ8NFZ3 816 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 STON2Q8WXE9 905 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 GFM2Q969S9 779 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 MYNNQ9NPC7 610 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 ASIC5Q9NY37 505 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 HEY2Q9UBP5 337 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 GPN3Q9UHW5 284 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 PHF11Q9UIL8 331 aa16.97■□□□□ 0.31
TRAPPC4-203ENST00000447216 OR2W5A6NFC9 320 aa16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 GLOD5A6NK44 160 aa16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 WASHC1A8K0Z3 465 aa16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 PSMD12O00232 456 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 CYR61O00622 381 aa16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 PROM1O43490 865 aa16.96■□□□□ 0.31
TRAPPC4-203ENST00000447216 B4GALT2O60909 372 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms