RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SLC19A1P41440 591 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 NR1H2P55055 460 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 PCBP4P57723 403 aaKnown RBP16.6■□□□□ 0.25
SMC6-206ENST00000446852 SRP54P61011 504 aaKnown RBP16.6■□□□□ 0.25
SMC6-206ENST00000446852 EEF1A2Q05639 463 aaKnown RBP16.6■□□□□ 0.25
SMC6-206ENST00000446852 SCARB2Q14108 478 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 ADPRMQ3LIE5 342 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 ZNF425Q6IV72 752 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 TRIM40Q6P9F5 258 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 NRROSQ86YC3 692 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 EXOSC8Q96B26 276 aaKnown RBP16.6■□□□□ 0.25
SMC6-206ENST00000446852 MS4A6EQ96DS6 147 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 TMEM38AQ9H6F2 299 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 OR6C2Q9NZP2 312 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 KLF15Q9UIH9 416 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 AP1M2Q9Y6Q5 423 aa16.6■□□□□ 0.25
SMC6-206ENST00000446852 TRIOBPQ9H2D6 2365 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 TNFRSF10CO14798 259 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 SUV39H1O43463 412 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 HS6ST1O60243 411 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 UQCRC2P22695 453 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 CMPK1P30085 196 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 Q6ZSR6 202 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 HIPK1Q86Z02 1210 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 SARGQ9BW04 601 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 FAM118AQ9NWS6 357 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 ADPRHL2Q9NX46 363 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 SCN3AQ9NY46 2000 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 BTN3A3O00478 584 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 KDM1AO60341 852 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 PRIM2P49643 509 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 MANFP55145 182 aaKnown RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 YPEL5P62699 121 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 RBBP4Q09028 425 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 BIRC2Q13490 618 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 TMEM35AQ53FP2 167 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 PIWIL3Q7Z3Z3 882 aaKnown RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 SLC22A18ASQ8N1D0 253 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 OR13H1Q8NG92 308 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 OR5P2Q8WZ92 322 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 RBM38Q9H0Z9 239 aaKnown RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 SIRT3Q9NTG7 399 aaPredicted RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 IFT80Q9P2H3 777 aaPredicted RBP16.59■□□□□ 0.25
SMC6-206ENST00000446852 PCDHGA4Q9Y5G9 962 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 USP34Q70CQ2 3546 aa16.59■□□□□ 0.25
SMC6-206ENST00000446852 TDRD6O60522 2096 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 MYO1GB0I1T2 1018 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 ERI3O43414 337 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 PRKRAO75569 313 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 KRT75O95678 551 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 F3P13726 295 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 NDUFS1P28331 727 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 AHRP35869 848 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 ITGA1P56199 1179 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 RPS26P62854 115 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 HSPB3Q12988 150 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 KCNAB2Q13303 367 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 NDUFAF5Q5TEU4 345 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 TSEN54Q7Z6J9 526 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 DCP2Q8IU60 420 aaKnown RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 FRMD1Q8N878 549 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 ARL10Q8N8L6 244 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 TAMM41Q96BW9 452 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 ZNF764Q96H86 408 aaPredicted RBP16.58■□□□□ 0.25
SMC6-206ENST00000446852 DOHHQ9BU89 302 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 NLNQ9BYT8 704 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 C2orf42Q9NWW7 574 aa16.58■□□□□ 0.25
SMC6-206ENST00000446852 WASHC1A8K0Z3 465 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 B4GALT2O60909 372 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 GSTM5P46439 218 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 SELENOWP63302 87 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 CDK6Q00534 326 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 RBM44Q6ZP01 1051 aaKnown RBP16.58■□□□□ 0.24
SMC6-206ENST00000446852 TMEM26Q6ZUK4 368 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 OR8K5Q8NH50 307 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 NEURL3Q96EH8 262 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 TSC22D3Q99576 134 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 GABARAPL1Q9H0R8 117 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 PRDM7Q9NQW5 492 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 THEGQ9P2T0 379 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 CYP8B1Q9UNU6 501 aa16.58■□□□□ 0.24
SMC6-206ENST00000446852 ARAFP10398 606 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 TNFRSF1BP20333 461 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 CDK9P50750 372 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 TRA2BP62995 288 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 SMAD4Q13485 552 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 TOR1AIP1Q5JTV8 583 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 SAXO2Q658L1 398 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 ABHD17CQ6PCB6 329 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 CYP4Z1Q86W10 505 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 ZC3H7AQ8IWR0 971 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 FLVCR1-AS1Q8TAF5 88 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 SRMSQ9H3Y6 488 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 RAD21L1Q9H4I0 556 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 TRNAU1APQ9NX07 287 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 NDUFA13Q9P0J0 144 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 BAG5Q9UL15 447 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms