RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MSLNLQ96KJ4 702 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 PKP4Q99569 1192 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 MND1Q9BWT6 205 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 CHST8Q9H2A9 424 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ANKRA2Q9H9E1 313 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 IL17CQ9P0M4 197 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 HELZP42694 1942 aaKnown RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 RFXAPO00287 272 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 RPL9P32969 192 aaKnown RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 MAPKAPK2P49137 400 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 RPS25P62851 125 aaKnown RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 ABATP80404 500 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 MZT2BQ6NZ67 158 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 C16orf59Q7L2K0 433 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 LAS2Q8IYD9 372 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 GALNT11Q8NCW6 608 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 FAM46DQ8NEK8 389 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 SLC6A18Q96N87 628 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ACADMP11310 421 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 PSEN2P49810 448 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 PER3P56645 1201 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ZNF91Q05481 1191 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 ARMC12Q5T9G4 340 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 OR2G6Q5TZ20 316 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 TMEM65Q6PI78 240 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 IQCF1Q8N6M8 205 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 GPR156Q8NFN8 814 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 OR4A15Q8NGL6 344 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 KATNB1Q9BVA0 655 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 FAM8A1Q9UBU6 413 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ZNF222Q9UK12 451 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 MGAT4AQ9UM21 535 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 OR5K3A6NET4 321 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 GABRR3A8MPY1 467 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 C1SP09871 688 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 NAGAP17050 411 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 CTRB1P17538 263 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 DDCP20711 480 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ITGB7P26010 798 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 PCGF2P35227 344 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 AVPR1BP47901 424 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 TAF10Q12962 218 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ABRQ12979 859 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 FCN2Q15485 313 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 CTRB2Q6GPI1 263 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 CHCHD4Q8N4Q1 142 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 ZNF431Q8TF32 576 aaPredicted RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 DNAJA4Q8WW22 397 aaPredicted RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 AKAP1Q92667 903 aaKnown RBP eCLIP13.35□□□□□ -0.27
VPS52-212ENST00000445902 HHIPQ96QV1 700 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 TSSK6Q9BXA6 273 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 SLC25A19Q9HC21 320 aa13.35□□□□□ -0.27
VPS52-212ENST00000445902 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
VPS52-212ENST00000445902 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 TEX51A0A1B0GUA7 166 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 FADS2P1A8MWK0 482 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 ATP6V1G2-DDX39BF2Z307 99 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 TRIM77I1YAP6 450 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 ORC5O43913 435 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 DPM1O60762 260 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 SSTR2P30874 369 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 SGSHP51688 502 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 AGFG1P52594 562 aaKnown RBP13.34□□□□□ -0.27
VPS52-212ENST00000445902 CLDN20P56880 219 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 TEKQ02763 1124 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 RBBP4Q09028 425 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
VPS52-212ENST00000445902 CPTPQ5TA50 214 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 TEX261Q6UWH6 196 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 GDPGP1Q6ZNW5 385 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 FAM9CQ8IZT9 166 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 NANOGP1Q8N7R0 232 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 C7orf57Q8NEG2 295 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 CSGALNACT1Q8TDX6 532 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 HYLS1Q96M11 299 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
VPS52-212ENST00000445902 MAPKAP1Q9BPZ7 522 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
VPS52-212ENST00000445902 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 RAB23Q9ULC3 237 aa13.34□□□□□ -0.27
VPS52-212ENST00000445902 RWDD3Q9Y3V2 267 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms