RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 ARMCX4Q5H9R4 360 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 CRB2Q5IJ48 1285 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 NXPE3Q969Y0 559 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 NUS1Q96E22 293 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 CHCHD6Q9BRQ6 235 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 FAM32AQ9Y421 112 aaKnown RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 AP1M2Q9Y6Q5 423 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 METTL15A6NJ78 407 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 CCNB2O95067 398 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 EIF2DP41214 584 aaKnown RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 MAPK9P45984 424 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 ALDH9A1P49189 494 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 PPP5CP53041 499 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 DOC2BQ14184 412 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 DHCR24Q15392 516 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 ZNF630Q2M218 657 aaPredicted RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 MLIPQ5VWP3 458 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 KLHL17Q6TDP4 642 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 CCDC80Q76M96 950 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 GRASPQ7Z6J2 395 aaPredicted RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 CLIP4Q8N3C7 705 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 Q96MT0 163 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 OR5M11Q96RB7 305 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 RSPO3Q9BXY4 272 aaPredicted RBP12.03□□□□□ -0.48
TRO-215ENST00000445561 MIR1-1HGQ9H1L0 117 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 SLAMF7Q9NQ25 335 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 TMEM98Q9Y2Y6 226 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 HCN4Q9Y3Q4 1203 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 NINQ8N4C6 2090 aa12.03□□□□□ -0.48
TRO-215ENST00000445561 FFAR1O14842 300 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 TBX1O43435 398 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 RPLP0P05388 317 aaKnown RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 BCHEP06276 602 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 ARAFP10398 606 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 C6P13671 934 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 MAGP20916 626 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 FEN1P39748 380 aaKnown RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 LIMS1P48059 325 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 LIM2P55344 173 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 DSTNP60981 165 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 RPS3AP61247 264 aaKnown RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 ST8SIA6P61647 398 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 PUM1Q14671 1186 aaKnown RBP eCLIP12.02□□□□□ -0.48
TRO-215ENST00000445561 BCL7AQ4VC05 210 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 TMIGD1Q6UXZ0 262 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 CEACAM20Q6UY09 585 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 SFTPA1Q8IWL2 248 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 GPR65Q8IYL9 337 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 NRSN1Q8IZ57 195 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 ZNF557Q8N988 423 aaPredicted RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 FBXO15Q8NCQ5 510 aaPredicted RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 HTRA1Q92743 480 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 ARRDC3Q96B67 414 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 COL21A1Q96P44 957 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 ZDHHC5Q9C0B5 715 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 NMNAT1Q9HAN9 279 aaPredicted RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 ZDHHC4Q9NPG8 344 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 SCHIP1Q9P0W5 487 aaPredicted RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 PAIP2BQ9ULR5 123 aaKnown RBP12.02□□□□□ -0.48
TRO-215ENST00000445561 ANGPT4Q9Y264 503 aa12.02□□□□□ -0.48
TRO-215ENST00000445561 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 PLPP1O14494 284 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 DNTTP04053 509 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 IGFBP1P08833 259 aaPredicted RBP12.02□□□□□ -0.49
TRO-215ENST00000445561 CISD3P0C7P0 127 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 CHMP24386 653 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 UGT2B10P36537 528 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 RGS6P49758 472 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 EPHA5P54756 1037 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 TUBA1BP68363 451 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 ARHGEF6Q15052 776 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 MED22Q15528 200 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 PRAMEF14Q5SWL7 426 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 PRAMEF13Q5VWM6 474 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 ARMC8Q8IUR7 673 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 ADGRF3Q8IZF5 1079 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 HORMAD2Q8N7B1 307 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
TRO-215ENST00000445561 DENND6BQ8NEG7 585 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 HPS1Q92902 700 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 RAB8BQ92930 207 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
TRO-215ENST00000445561 LRIG1Q96JA1 1093 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 EPHX3Q9H6B9 360 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 ITM2CQ9NQX7 267 aa12.02□□□□□ -0.49
TRO-215ENST00000445561 ENPP4Q9Y6X5 453 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms