RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 FAM47BQ8NA70 645 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 SSC4DQ8WTU2 575 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 CSF3RQ99062 836 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.16□□□□□ -0.3
COMMD3-202ENST00000444869 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-202ENST00000444869 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 PRTFDC1Q9NRG1 225 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 ZNF358Q9NW07 568 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 ADGRE2Q9UHX3 823 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
COMMD3-202ENST00000444869 TNPO3Q9Y5L0 923 aaKnown RBP13.16□□□□□ -0.3
COMMD3-202ENST00000444869 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 SVILO95425 2214 aa13.16□□□□□ -0.3
COMMD3-202ENST00000444869 BLACEA4D250 179 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 WIPF3A6NGB9 483 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 CLDN4O14493 209 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 RBP1P09455 135 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
COMMD3-202ENST00000444869 GCAP28676 217 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 PIK3CBP42338 1070 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ARFIP1P53367 373 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 RCN2Q14257 317 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 TSNAXIP1Q2TAA8 658 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 KHDRBS2Q5VWX1 349 aaKnown RBP13.15□□□□□ -0.3
COMMD3-202ENST00000444869 GOLGA7Q7Z5G4 137 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 IFT20Q8IY31 132 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 CYP4X1Q8N118 509 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ACOT4Q8N9L9 421 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 L3MBTL4Q8NA19 623 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 NR4A3Q92570 626 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 CMTM7Q96FZ5 175 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 MAGEB10Q96LZ2 347 aaPredicted RBP13.15□□□□□ -0.3
COMMD3-202ENST00000444869 TXLNGYQ9BZA5 131 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 OLAHQ9NV23 265 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ABI3Q9P2A4 366 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 CPSF2Q9P2I0 782 aaKnown RBP13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ANGPTL3Q9Y5C1 460 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 PCDHGA11Q9Y5H2 935 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 ICE1Q9Y2F5 2266 aa13.15□□□□□ -0.3
COMMD3-202ENST00000444869 GABRR3A8MPY1 467 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TRIM49D1C9J1S8 452 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 POC1B-GALNT4F8VUJ3 575 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 H0YIV9 168 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 RTCAO00442 366 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 STX16O14662 325 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 NEURL1O76050 574 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 SIX3O95343 332 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TGFB1P01137 390 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 MYBL2P10244 700 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 PCNAP12004 261 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 HIST1H1TP22492 207 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 CD96P40200 585 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 GPR143P51810 404 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 GTF2H2Q13888 395 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ELOAQ14241 798 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 DEPDC1Q5TB30 811 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 GTF2H2CQ6P1K8 395 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 PTGR2Q8N8N7 351 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 B3GNT7Q8NFL0 401 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 HUS1BQ8NHY5 278 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 UHMK1Q8TAS1 419 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 SCMH1Q96GD3 660 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 SIGLEC12Q96PQ1 595 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 UTP23Q9BRU9 249 aaKnown RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 IPPKQ9H8X2 491 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ADAP2Q9NPF8 381 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ERRFI1Q9UJM3 462 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-202ENST00000444869 TMCO1Q9UM00 188 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 PPT2Q9UMR5 302 aa13.14□□□□□ -0.31
COMMD3-202ENST00000444869 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 CYSRT1A8MQ03 144 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 A8MUA0 341 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 RIPK2O43353 540 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 CTNSO60931 367 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 MYO1DO94832 1006 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 RASAL1O95294 804 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 DDAH2O95865 285 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 LDLRP01130 860 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 SBK3P0C264 359 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 GP1BBP13224 206 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 TPP2P29144 1249 aaPredicted RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms