RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 KIR2DL3P43628 341 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 MED22Q15528 200 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 LAMTOR1Q6IAA8 161 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 SDE2Q6IQ49 451 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 DOK6Q6PKX4 331 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 GALNT10Q86SR1 603 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 NLRP8Q86W28 1048 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 AMIGO1Q86WK6 493 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 ZZZ3Q8IYH5 903 aa18.13■□□□□ 0.49
PMPCB-204ENST00000444457 MBD1Q9UIS9 605 aaPredicted RBP18.13■□□□□ 0.49
PMPCB-204ENST00000444457 TRAV19A0A0A6YYK7 116 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 LEFTY2O00292 366 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 TPPPO94811 219 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 C8GP07360 202 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CSF3P09919 207 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 RORCP51449 518 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 DAB2P98082 770 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 PCDH1Q08174 1060 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 QPRTQ15274 297 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 VMACQ2NL98 169 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 PAMR1Q6UXH9 720 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 SKA2Q8WVK7 121 aaPredicted RBP18.12■□□□□ 0.49
PMPCB-204ENST00000444457 ELOVL6Q9H5J4 265 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CMAHPQ9Y471 501 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 LTBP2Q14767 1821 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CXorf51AA0A1B0GTR3 108 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 IQCMA0A1B0GVH7 501 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 A0A1W2PRU2 124 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 PRPS2P11908 318 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 ALAS2P22557 587 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 S100A3P33764 101 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 SLC6A12P48065 614 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 HOXC5Q00444 222 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 DOC2BQ14184 412 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 LRRC73Q5JTD7 316 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 ERICH5Q6P6B1 374 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 FAM124AQ86V42 546 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 VRK3Q8IV63 474 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 B3GNT7Q8NFL0 401 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 BTN2A2Q8WVV5 523 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 ASB11Q8WXH4 323 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 TSSK3Q96PN8 268 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CNPPD1Q9BV87 410 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CPEB1Q9BZB8 566 aaKnown RBP18.12■□□□□ 0.49
PMPCB-204ENST00000444457 PCDHGA2Q9Y5H1 932 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 CFAP20Q9Y6A4 193 aaKnown RBP18.12■□□□□ 0.49
PMPCB-204ENST00000444457 DOCK6Q96HP0 2047 aa18.12■□□□□ 0.49
PMPCB-204ENST00000444457 TGM5O43548 720 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 ADRA2AP08913 450 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 HIST1H2AGP0C0S8 130 aaPredicted RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 HIST1H2ADP20671 130 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 IDH2P48735 452 aaKnown RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SPINT3P49223 89 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SNRPD2P62316 118 aaKnown RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 TLE2Q04725 743 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PTCHD3Q3KNS1 767 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 ANKRD46Q86W74 232 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 ZNF557Q8N988 423 aaPredicted RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 OR4M2Q8NGB6 313 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 HIST1H2AHQ96KK5 128 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 C7orf34Q96L11 122 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 HIST1H2AJQ99878 128 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 H2AFJQ9BTM1 129 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SMG9Q9H0W8 520 aaKnown RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 TMEM39AQ9NV64 488 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 B4GALT6Q9UBX8 382 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SNTNA6NMZ2 147 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 B3GALT4O96024 378 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 LRG1P02750 347 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 CSF2P04141 144 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 GSTM1P09488 218 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PRPH2P23942 346 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 TACR1P25103 407 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PTGS2P35354 604 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PRMT2P55345 433 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 DEFB103AP81534 67 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 BOP1Q14137 746 aaKnown RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 GPR19Q15760 415 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 ZDHHC20Q5W0Z9 365 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SAXO2Q658L1 398 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 SLC39A5Q6ZMH5 540 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 L3MBTL4Q8NA19 623 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 ZNF296Q8WUU4 475 aaPredicted RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 CMTM7Q96FZ5 175 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 BRD9Q9H8M2 597 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PAK6Q9NQU5 681 aaPredicted RBP18.11■□□□□ 0.49
PMPCB-204ENST00000444457 MS4A12Q9NXJ0 267 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 GLTPQ9NZD2 209 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 CD84Q9UIB8 345 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 PCDHGB3Q9Y5G1 929 aa18.11■□□□□ 0.49
PMPCB-204ENST00000444457 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
PMPCB-204ENST00000444457 LILRB3O75022 631 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 MPC1LP0DKB6 136 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 SDC1P18827 310 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 HNMTP50135 292 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 TATDN3Q17R31 274 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 FAM131AQ6UXB0 335 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 FAM9CQ8IZT9 166 aa18.1■□□□□ 0.49
PMPCB-204ENST00000444457 GDPD1Q8N9F7 314 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms