RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PRDM9Q9NQV7 894 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 NMRK1Q9NWW6 199 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 MS4A12Q9NXJ0 267 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 GPR83Q9NYM4 423 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 AHSPQ9NZD4 102 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 KCMF1Q9P0J7 381 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 C5AR2Q9P296 337 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 ADAM29Q9UKF5 820 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 SPACA6W5XKT8 324 aa14.15□□□□□ -0.14
CSNK1E-210ENST00000442216 SERTM1A2A2V5 107 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 RTCAO00442 366 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 CYR61O00622 381 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 B4GALT2O60909 372 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 SPAG7O75391 227 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 CDC123O75794 336 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 ABRAXAS2Q15018 415 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 VWA5B1Q5TIE3 1220 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 IRAK1BP1Q5VVH5 260 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 EXOC3L1Q86VI1 746 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 METTL6Q8TCB7 284 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 AGAP11Q8TF27 550 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 SELENOMQ8WWX9 145 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 MTFMTQ96DP5 389 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 IMMP1LQ96LU5 166 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 PTCHD1Q96NR3 888 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 TRMOQ9BU70 441 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF717Q9BY31 904 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 RBCK1Q9BYM8 510 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 LHPPQ9H008 270 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 STMN4Q9H169 189 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 RRAGDQ9NQL2 400 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF451Q9Y4E5 1061 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 CPAMD8Q8IZJ3 1885 aa14.14□□□□□ -0.15
CSNK1E-210ENST00000442216 IGKV3D-11A0A0A0MRZ8 115 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 FAM227AF5H4B4 570 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SAP18O00422 153 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 MANBAO00462 879 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SH3BGRLO75368 114 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ULK1O75385 1050 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ETHE1O95571 254 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 PDYNP01213 254 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ALPPP05187 535 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ITGA3P26006 1051 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 HMOX2P30519 316 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 BSGP35613 385 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 PGDP52209 483 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 EEF1A2Q05639 463 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 GALNT1Q10472 559 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 CSTF3Q12996 717 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SLAMF1Q13291 335 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 LANCL3Q6ZV70 420 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 NUDT13Q86X67 352 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 C10orf107Q8IVU9 208 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SCUBE1Q8IWY4 988 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 KBTBD2Q8IY47 623 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 CDYL2Q8N8U2 506 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SREK1Q8WXA9 508 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 MESP1Q9BRJ9 268 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 NUDT9Q9BW91 350 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF552Q9H707 407 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF160Q9HCG1 818 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 MID1IP1Q9NPA3 183 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 PRTFDC1Q9NRG1 225 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 LYARQ9NX58 379 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 SLC17A7Q9P2U7 560 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 PHF11Q9UIL8 331 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 TP53TG5Q9Y2B4 290 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 PIEZO2Q9H5I5 2752 aa14.13□□□□□ -0.15
CSNK1E-210ENST00000442216 ATRXP46100 2492 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 A0A0A6YYD5 115 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 OR2W5A6NFC9 320 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 A6NL46 340 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 TM9SF1O15321 606 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 CTNSO60931 367 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 SERPINA7P05543 415 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 CREB1P16220 341 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 ALDH3A1P30838 453 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 ETV4P43268 484 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 OR4D2P58180 307 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 BTG2P78543 158 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 Q0VFX4 171 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 BIKQ13323 160 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 EXT1Q16394 746 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 SFT2D3Q587I9 215 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 PLAG1Q6DJT9 500 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 MRM1Q6IN84 353 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 JMJD6Q6NYC1 403 aaPredicted RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 ASB18Q6ZVZ8 466 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 PAGE2Q7Z2X7 111 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 PARP9Q8IXQ6 854 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 METTL4Q8N3J2 472 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 TSLPQ969D9 159 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 THOC3Q96J01 351 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 LPAR4Q99677 370 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 MAPKAP1Q9BPZ7 522 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 WDR77Q9BQA1 342 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms