RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 VPS35Q96QK1 796 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 PIP5K1AQ99755 562 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 RNF167Q9H6Y7 350 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF556Q9HAH1 456 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 ACER3Q9NUN7 267 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 IMPAD1Q9NX62 359 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 IFT52Q9Y366 437 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 KLK4Q9Y5K2 254 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 CFAP20Q9Y6A4 193 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 UNC80Q8N2C7 3258 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 MN1Q10571 1320 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 PCM1Q15154 2024 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 J3KTA2 159 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FOXE1O00358 373 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PLK4O00444 970 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF197O14709 1029 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 GPR37L1O60883 481 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 KCNK2O95069 426 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 S100A5P33763 92 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 HMGA2P52926 109 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 UGT2B15P54855 530 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 TPTEP56180 551 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PCBP3P57721 371 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 CDK6Q00534 326 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 BCL2A1Q16548 175 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF630Q2M218 657 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 SOWAHCQ53LP3 525 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 TRIM40Q6P9F5 258 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 C19orf48Q6RUI8 117 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FAM83FQ8NEG4 500 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 EFHD2Q96C19 240 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FAM129BQ96TA1 746 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 CENPOQ9BU64 300 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 CDCA4Q9BXL8 241 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 LMAN2LQ9H0V9 348 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 MS4A12Q9NXJ0 267 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ACSL6Q9UKU0 697 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 HCN4Q9Y3Q4 1203 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ARRDC5A6NEK1 342 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 M0R129 80 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 POU2F2P09086 479 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 RPL3P39023 403 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ETV6P41212 452 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PRIM2P49643 509 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 TBPL1P62380 186 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF284Q2VY69 593 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 TMEM25Q86YD3 366 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 LAS2Q8IYD9 372 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FBXO15Q8NCQ5 510 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 B3GNT7Q8NFL0 401 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 GLYATL1Q969I3 302 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 CIDECQ96AQ7 238 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PPCDCQ96CD2 204 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FOPNLQ96NB1 174 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 MAPKAP1Q9BPZ7 522 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PRM3Q9NNZ6 103 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 MYNNQ9NPC7 610 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 DMRT3Q9NQL9 472 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 CNOT2Q9NZN8 540 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 FTSJ1Q9UET6 329 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 ENOPH1Q9UHY7 261 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PEX16Q9Y5Y5 336 aa15.67■□□□□ 0.1
CLCNKA-203ENST00000439316 PRAMEF33A0A0G2JMD5 474 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SH3D21A4FU49 640 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 EFCAB10A6NFE3 127 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 PCDH17O14917 1159 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 HAT1O14929 419 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 PRAMEF10O60809 474 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 KLHL18O94889 574 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 CCNB2O95067 398 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 IFNA14P01570 189 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ARAFP10398 606 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TIMP2P16035 220 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 POLR2EP19388 210 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 PDHA2P29803 388 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 HOXD12P35452 270 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 RECQLP46063 649 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SEPHS1P49903 392 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 CRISP3P54108 245 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 MC1RQ01726 317 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SLBPQ14493 270 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 KCNJ8Q15842 424 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF658BQ4V348 819 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 FAM71E1Q6IPT2 247 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TECPR1Q7Z6L1 1165 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 RNF130Q86XS8 419 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 C16orf78Q8WTQ4 265 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF480Q8WV37 535 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 Q96MT0 163 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 CHCHD6Q9BRQ6 235 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 IGFLR1Q9H665 355 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TAS2R16Q9NYV7 291 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC6A14Q9UN76 642 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SH2B3Q9UQQ2 575 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ENPP4Q9Y6X5 453 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ZAR1LA6NP61 321 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 LEFTY1O75610 366 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 DLGAP3O95886 979 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ADRA2AP08913 450 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms