RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ZNF480Q8WV37 535 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 SH3GL2Q99962 352 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 TMBIM4Q9HC24 238 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 RASSF1Q9NS23 344 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 PNPLA3Q9NST1 481 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 INTS10Q9NVR2 710 aaKnown RBP13.14□□□□□ -0.31
LINC01088-201ENST00000437737 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 LGALS13Q9UHV8 139 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 FBXO5Q9UKT4 447 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 CORO1CQ9ULV4 474 aaPredicted RBP13.14□□□□□ -0.31
LINC01088-201ENST00000437737 NAALAD2Q9Y3Q0 740 aa13.14□□□□□ -0.31
LINC01088-201ENST00000437737 SMIM23A6NLE4 172 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 HMGB1P1B2RPK0 211 aaPredicted RBP13.13□□□□□ -0.31
LINC01088-201ENST00000437737 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
LINC01088-201ENST00000437737 CHRM3P20309 590 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 ARNTP27540 789 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 KIR2DL3P43628 341 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 MPP1Q00013 466 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 GBX1Q14549 363 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 GXYLT1Q4G148 440 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 ACSBG2Q5FVE4 666 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 UBAP2Q5T6F2 1119 aaKnown RBP13.13□□□□□ -0.31
LINC01088-201ENST00000437737 TMEM198Q66K66 360 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 ZNF470Q6ECI4 717 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 ZNF585AQ6P3V2 769 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 STRA8Q7Z7C7 330 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 CDC20BQ86Y33 519 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 TMEM156Q8N614 296 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 KCT2Q8NC54 265 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 C2CD4AQ8NCU7 369 aaPredicted RBP13.13□□□□□ -0.31
LINC01088-201ENST00000437737 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 OR5T3Q8NGG3 340 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 OR5M9Q8NGP3 310 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 EPS8L3Q8TE67 593 aaKnown RBP13.13□□□□□ -0.31
LINC01088-201ENST00000437737 DCAKDQ8WVC6 231 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 C18orf12Q96KH6 178 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 LANCL2Q9NS86 450 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 TMEM184CQ9NVA4 438 aa13.13□□□□□ -0.31
LINC01088-201ENST00000437737 KCNE1BA0A087WTH5 132 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 FIGNL2A6NMB9 653 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 CXorf49A8MYA2 514 aaPredicted RBP13.12□□□□□ -0.31
LINC01088-201ENST00000437737 H3BMM5 538 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 ACOT7O00154 380 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 FHP07954 510 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 KRT15P19012 456 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 JAK1P23458 1154 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 HRH2P25021 359 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 ACVR2AP27037 513 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 NR0B1P51843 470 aaKnown RBP13.12□□□□□ -0.31
LINC01088-201ENST00000437737 PLGLB1Q02325 96 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 B3GNT6Q6ZMB0 384 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
LINC01088-201ENST00000437737 ASPGQ86U10 573 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 TBC1D20Q96BZ9 403 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 MRRFQ96E11 262 aaKnown RBP13.12□□□□□ -0.31
LINC01088-201ENST00000437737 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 ATP6V1G3Q96LB4 118 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 CCDC138Q96M89 665 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 PTCHD1Q96NR3 888 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 BIRC8Q96P09 236 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 TTYH2Q9BSA4 534 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 SMYD2Q9NRG4 433 aa13.12□□□□□ -0.31
LINC01088-201ENST00000437737 A0A0G2JNJ9 132 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 FEZF1A0PJY2 475 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 FAM166BA8MTA8 275 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 E5RI56 91 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 B4GALT2O60909 372 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 RAF1P04049 648 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 INHBBP09529 407 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 SLC35G6P0C7Q6 338 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 GCAP28676 217 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 PPIAP62937 165 aaKnown RBP13.11□□□□□ -0.31
LINC01088-201ENST00000437737 KEAP1Q14145 624 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 EFTUD2Q15029 972 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01088-201ENST00000437737 TYSND1Q2T9J0 566 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 SLC25A35Q3KQZ1 300 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 MDGA2Q7Z553 956 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 CREB3L4Q8TEY5 395 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 SLC13A3Q8WWT9 602 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 SMC6Q96SB8 1091 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 RBBP8Q99708 897 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 MDFIQ99750 246 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 TIMMDC1Q9NPL8 285 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
LINC01088-201ENST00000437737 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 Q9UFV3 132 aa13.11□□□□□ -0.31
LINC01088-201ENST00000437737 TBK1Q9UHD2 729 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms