RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TXNDC8Q6A555 127 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 LRRN1Q6UXK5 716 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PIM3Q86V86 326 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UBE2J1Q9Y385 318 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A9O60656 530 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PTHP01270 115 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A6P19224 532 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 MSX2P35548 267 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 MAN2A2P49641 1150 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 RAB8AP61006 207 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF773Q6PK81 442 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 NDNFQ8TB73 568 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SORCS1Q8WY21 1168 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A7Q9HAW7 530 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A10Q9HAW8 530 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A8Q9HAW9 530 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ACTR3BQ9P1U1 418 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 OR6C74A6NCV1 312 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 LRCH4O75427 683 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SOD2P04179 222 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PRKCGP05129 697 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 GABRA3P34903 492 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ACTC1P68032 377 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ACTA1P68133 377 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 CLNKQ7Z7G1 428 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 THAP3Q8WTV1 239 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 THAP4Q8WY91 577 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SYT3Q9BQG1 590 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 CCDC163A0A0D9SF12 145 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 BTBD17A6NE02 478 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 PHYHO14832 338 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 LILRB5O75023 590 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 AK1P00568 194 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CSF2P04141 144 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 FRKP42685 505 aaPredicted RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CDKN2BP42772 138 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 AKR1C2P52895 323 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 GRM7Q14831 915 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 LASP1Q14847 261 aaKnown RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF630Q2M218 657 aaPredicted RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 PLEKHS1Q5SXH7 462 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 NTAN1Q96AB6 310 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 HERPUD2Q9BSE4 406 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SDCBP2Q9H190 292 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 LEFTY2O00292 366 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 EDF1O60869 148 aaKnown RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CDH1P12830 882 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 MTPNP58546 118 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SSTP61278 116 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SEMG2Q02383 582 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 PTPRRQ15256 657 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 FUKQ8N0W3 1084 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TNFRSF25Q93038 417 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 DNAJC19Q96DA6 116 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ACTRT3Q9BYD9 372 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 DPEP3Q9H4B8 488 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ZIM2Q9NZV7 527 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CNOT4O95628 575 aaKnown RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 LIN52Q52LA3 116 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 OR5L1Q8NGL2 311 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 NFKBIDQ8NI38 313 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 RHBDF1Q96CC6 855 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ECHDC3Q96DC8 303 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ANKRD12Q6UB98 2062 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TSPAN4O14817 238 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SEC14L5O43304 696 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SSX5O60225 188 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CCDC71LQ8N9Z2 235 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 DCAF4L2Q8NA75 395 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SCML1Q9UN30 329 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 OR6C6A6NF89 314 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SUOXP51687 545 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ATAD3CQ5T2N8 411 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 MREGQ8N565 214 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 HS6ST2Q96MM7 605 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 DUSP23Q9BVJ7 150 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 HOXD1Q9GZZ0 328 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ZFP57Q9NU63 452 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SLC17A7Q9P2U7 560 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ANKRD66B4E2M5 251 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CCL22O00626 93 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SLC22A1O15245 554 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 FLRT2O43155 660 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 MSL3P1P0C860 447 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 SLC5A8Q8N695 610 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TCEANCQ8N8B7 351 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 OR56A3Q8NH54 315 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 NKD2Q969F2 451 aaPredicted RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 CREB3L1Q96BA8 519 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 MUCL1Q96DR8 90 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms