RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 LCA5Q86VQ0 697 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ZNF595Q8IYB9 648 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ACOT4Q8N9L9 421 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 WDR20Q8TBZ3 569 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ACMSDQ8TDX5 336 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ZNF483Q8TF39 744 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 REPS1Q96D71 796 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 MAGEB10Q96LZ2 347 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 CDK15Q96Q40 435 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 MTERF1Q99551 399 aaKnown RBP14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ASF1BQ9NVP2 202 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 TMEM216Q9P0N5 145 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 MAP10Q9P2G4 905 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 VPS4AQ9UN37 437 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 MRPS33Q9Y291 106 aaKnown RBP14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
TSPAN9-203ENST00000431374 ASH1LQ9NR48 2969 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 SCN3AQ9NY46 2000 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 TGFBR3LH3BV60 316 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 CLDN4O14493 209 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 F10P00742 488 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 GNLYP22749 145 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 SSR2P43308 183 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 CCNG1P51959 295 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 PHEXP78562 749 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 SLC13A2Q13183 592 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 AP5B1Q2VPB7 878 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 ACER2Q5QJU3 275 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 CRLF3Q8IUI8 442 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 KIF2BQ8N4N8 673 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 NFAM1Q8NET5 270 aaPredicted RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 ELP5Q8TE02 316 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 UBLCP1Q8WVY7 318 aaPredicted RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 ATP6V1E2Q96A05 226 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 RGMAQ96B86 450 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 ZNF354BQ96LW1 612 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 BARD1Q99728 777 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 NPAS2Q99743 824 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 MAPKAP1Q9BPZ7 522 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 CENPKQ9BS16 269 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 NTMT1Q9BV86 223 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 SORBS1Q9BX66 1292 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 C1QTNF3Q9BXJ4 246 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 STMN3Q9NZ72 180 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 TBK1Q9UHD2 729 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 NTNG1Q9Y2I2 539 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 COPG1Q9Y678 874 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.12
TSPAN9-203ENST00000431374 TRAV17A0A0B4J275 112 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 OR5H15A6NDH6 313 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 A8MUA0 341 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 GOLGA8RI6L899 631 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 FOXE1O00358 373 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PLPP1O14494 284 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 CTNSO60931 367 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 ETHE1O95571 254 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PYGBP11216 843 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PTX3P26022 381 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PPP2R1BP30154 601 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 ARL1P40616 181 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 NEK2P51955 445 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 RAP1GDS1P52306 607 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 ARFIP1P53367 373 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 TAS2R50P59544 299 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 TERF2Q15554 542 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 GGTA1PQ4G0N0 100 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 RPS27LQ71UM5 84 aaKnown RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 TDRPQ86YL5 185 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 BEST3Q8N1M1 668 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 SLC5A8Q8N695 610 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 OR1N1Q8NGS0 311 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 SLC29A3Q9BZD2 475 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PPCSQ9HAB8 311 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 SEMA4BQ9NPR2 832 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PSD3Q9NYI0 1048 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 PPT2Q9UMR5 302 aa14.32□□□□□ -0.12
TSPAN9-203ENST00000431374 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 CLEC18AA5D8T8 446 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 TCP11X1B4DZS4 312 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 MAN1A2O60476 641 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 MYO1DO94832 1006 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 GSTA1P08263 222 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 TAC1P20366 129 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 SLCO1A2P46721 670 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 CDH13P55290 713 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 VSNL1P62760 191 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 HERVK_113P63132 956 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 CUL3Q13618 768 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 MEP1AQ16819 746 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 C10orf62Q5T681 223 aaPredicted RBP14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 FRG2Q64ET8 278 aa14.31□□□□□ -0.12
TSPAN9-203ENST00000431374 RPUSD3Q6P087 351 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms