RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 REEP3Q6NUK4 255 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 P3H2Q8IVL5 708 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ANKRD53Q8N9V6 530 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
THBS3-202ENST00000428962 OR4C15Q8NGM1 316 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 F2RL3Q96RI0 385 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 SORBS1Q9BX66 1292 aaKnown RBP13.05□□□□□ -0.32
THBS3-202ENST00000428962 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ZNF717Q9BY31 904 aaPredicted RBP13.05□□□□□ -0.32
THBS3-202ENST00000428962 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ZNF556Q9HAH1 456 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 A4GALTQ9NPC4 353 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
THBS3-202ENST00000428962 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 A0A1W2PPV9 198 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PDE9AO76083 593 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 INMTO95050 263 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 HTR1BP28222 390 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 KRT20P35900 424 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 GGT2P36268 569 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 CDH12P55289 794 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 RPS21P63220 83 aaKnown RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 MOGQ16653 247 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 MICAQ29983 383 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZNF829Q3KNS6 432 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 Q7L0L9 218 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 CACUL1Q86Y37 369 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 LGI4Q8N135 537 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZNF513Q8N8E2 541 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 FKBP10Q96AY3 582 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZBED6CLQ96FA7 236 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 MYOCQ99972 504 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 OSGEPL1Q9H4B0 414 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 MBNL1Q9NR56 388 aaKnown RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 A0A1W2PP55 124 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 TMX2-CTNND1H3BSU7 103 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 H7BY64 318 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 CLEC3AO75596 197 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 GABARAPO95166 117 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 IFNW1P05000 195 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ACP5P13686 325 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PSMB5P28074 263 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 WASP42768 502 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 XCR1P46094 333 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 RAB28P51157 221 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 TEKQ02763 1124 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 KCNC4Q03721 635 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 BNIP3Q12983 259 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 SGCGQ13326 291 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 SPDYE7PQ495Y7 208 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 KIAA1161Q6NSJ0 714 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 CEACAM20Q6UY09 585 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ADGRF3Q8IZF5 1079 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 TP53I13Q8NBR0 393 aaPredicted RBP13.04□□□□□ -0.32
THBS3-202ENST00000428962 FCGR1BQ92637 280 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PDXPQ96GD0 296 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PRAP1Q96NZ9 151 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 FEVQ99581 238 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ZSCAN32Q9NX65 697 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 PCDHGA6Q9Y5G7 932 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ENPP4Q9Y6X5 453 aa13.04□□□□□ -0.32
THBS3-202ENST00000428962 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 SLC22A1O15245 554 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 OR1F1O43749 312 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 SH3BP5O60239 455 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 KDM1AO60341 852 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 CLPXO76031 633 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 TBX6O95947 436 aaPredicted RBP13.03□□□□□ -0.32
THBS3-202ENST00000428962 MT-ND2P03891 347 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 RHCEP18577 417 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 CD247P20963 164 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
THBS3-202ENST00000428962 OR1E2P47887 323 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 KRT33BQ14525 404 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 EXOC3L2Q2M3D2 409 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
THBS3-202ENST00000428962 SYT6Q5T7P8 510 aaPredicted RBP13.03□□□□□ -0.32
THBS3-202ENST00000428962 DUS1LQ6P1R4 473 aaKnown RBP13.03□□□□□ -0.32
THBS3-202ENST00000428962 SLC16A12Q6ZSM3 486 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms