RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 OR5K4A6NMS3 321 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 EFCAB9A8MZ26 197 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 PRMT5O14744 637 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 ATP1B2P14415 290 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 ZNF8P17098 575 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 CD38P28907 300 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 SLC15A1P46059 708 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 KPNA2P52292 529 aaKnown RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 CTSCP53634 463 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 TPD52P55327 224 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 PFN3P60673 137 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 SLC35A2P78381 396 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 FOXD4Q12950 439 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 NFATC4Q14934 902 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 MFSD13AQ14CX5 517 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 MEP1AQ16819 746 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 IMPG1Q17R60 797 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 ZNF549Q6P9A3 640 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 ENPP7Q6UWV6 458 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 ZDHHC13Q8IUH4 622 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 FUNDC1Q8IVP5 155 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 SLC22A18ASQ8N1D0 253 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 ZBTB44Q8NCP5 570 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 LKAAEAR1Q8TD35 194 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 KLHDC7BQ96G42 594 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 GPR22Q99680 433 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 RBM4BQ9BQ04 359 aaKnown RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 TTYH2Q9BSA4 534 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 RBM4Q9BWF3 364 aaKnown RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.94□□□□□ -0.66
CECR3-201ENST00000428828 P2RY12Q9H244 342 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 RHOJQ9H4E5 214 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 EHD3Q9NZN3 535 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 SLC39A10Q9ULF5 831 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 PCDHGA2Q9Y5H1 932 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 PCYT1BQ9Y5K3 369 aaPredicted RBP10.94□□□□□ -0.66
CECR3-201ENST00000428828 HS3ST3A1Q9Y663 406 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 KCNE2Q9Y6J6 123 aa10.94□□□□□ -0.66
CECR3-201ENST00000428828 KNL1Q8NG31 2342 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 DNAH14Q0VDD8 3507 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 IGLV3-16A0A075B6K0 115 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 E5RI56 91 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 DLX3O60479 287 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 RHOBTB1O94844 696 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 WNT1P04628 370 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 IFNA16P05015 189 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 ITGAMP11215 1152 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 ALOX12P18054 663 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 HLA-DMAP28067 261 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 TEAD1P28347 426 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 CNR2P34972 360 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 HNF4AP41235 474 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 RABIFP47224 123 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 CSNK1EP49674 416 aaKnown RBP10.93□□□□□ -0.66
CECR3-201ENST00000428828 GZMKP49863 264 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 IRF9Q00978 393 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 ZNF460Q14592 562 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 TMEM220Q6QAJ8 160 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 LARP4Q71RC2 724 aaKnown RBP eCLIP10.93□□□□□ -0.66
CECR3-201ENST00000428828 ABI3BPQ7Z7G0 1075 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 PIM3Q86V86 326 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 SETD9Q8NE22 299 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 PIGKQ92643 395 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
CECR3-201ENST00000428828 SLC38A4Q969I6 547 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 TMEM125Q96AQ2 219 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 PDXPQ96GD0 296 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 MRPL57Q9BQC6 102 aaKnown RBP10.93□□□□□ -0.66
CECR3-201ENST00000428828 TRMOQ9BU70 441 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 REXO4Q9GZR2 422 aaKnown RBP10.93□□□□□ -0.66
CECR3-201ENST00000428828 TMEM74BQ9NUR3 256 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 TMEM45AQ9NWC5 275 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 C3orf18Q9UK00 162 aa10.93□□□□□ -0.66
CECR3-201ENST00000428828 MEIOCA2RUB1 952 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 BCAT2O15382 392 aaPredicted RBP10.92□□□□□ -0.66
CECR3-201ENST00000428828 NPPAP01160 153 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 FTH1P02794 183 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 ALPPP05187 535 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 OR56A5P0C7T3 313 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 RAP2AP10114 183 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 PKMP14618 531 aaKnown RBP10.92□□□□□ -0.66
CECR3-201ENST00000428828 TGFBR2P37173 567 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 GSK3BP49841 420 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 CDKN2DP55273 166 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 KIAA1024LP59773 190 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 S100A12P80511 92 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 GRIK2Q13002 908 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 CDK5R2Q13319 367 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
CECR3-201ENST00000428828 ZNF542PQ5EBM4 170 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 HECTD2Q5U5R9 776 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 NXNL2Q5VZ03 156 aa10.92□□□□□ -0.66
CECR3-201ENST00000428828 NLGN4XQ8N0W4 816 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms