RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 BMP10O95393 424 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ITGA3P26006 1051 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 PIK3CBP42338 1070 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 XCR1P46094 333 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 FOXA1P55317 472 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 RUNX2Q13950 521 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 FRG2Q64ET8 278 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ZNF793Q6ZN11 406 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ZCCHC23Q6ZST2 131 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 FRMD7Q6ZUT3 714 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 SPATA21Q7Z572 469 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 AGAP11Q8TF27 550 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 C8orf44Q96CB5 159 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 PEX11GQ96HA9 241 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 VPS50Q96JG6 964 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 QRFPRQ96P65 431 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 FRG2BQ96QU4 278 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 HBEGFQ99075 208 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 NUDT9Q9BW91 350 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 ATP13A2Q9NQ11 1180 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 PRDM7Q9NQW5 492 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 C14orf105Q9NVL8 296 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 MKL2Q9ULH7 1088 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 TSC22D4Q9Y3Q8 395 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 TIMM22Q9Y584 194 aa14.8□□□□□ -0.04
CLK3P2-201ENST00000427566 IDSB3KWA1 339 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 TRIM13O60858 407 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 PDYNP01213 254 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 CERS1P27544 350 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 EEF1A2Q05639 463 aaKnown RBP14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 KLRB1Q12918 225 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 LCP2Q13094 533 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 MINDY4Q4G0A6 757 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 DEPDC1Q5TB30 811 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 KHDRBS2Q5VWX1 349 aaKnown RBP14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 CES4AQ5XG92 561 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 KIRREL2Q6UWL6 708 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 CCDC121Q6ZUS5 278 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 GPRIN3Q6ZVF9 776 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 TRIM42Q8IWZ5 723 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 GALNT16Q8N428 558 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 AMER2Q8N7J2 671 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 ZNF75CPQ92670 426 aaPredicted RBP14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 CMTM7Q96FZ5 175 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 TGIF2Q9GZN2 237 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 MID1IP1Q9NPA3 183 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 TRPS1Q9UHF7 1281 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 MID2Q9UJV3 735 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 ARL2BPQ9Y2Y0 163 aa14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 PCDHGA9Q9Y5G4 932 aaKnown RBP14.79□□□□□ -0.04
CLK3P2-201ENST00000427566 WDR91A4D1P6 747 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 FAM227AF5H4B4 570 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 PLPP1O14494 284 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 SUV39H1O43463 412 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 EDF1O60869 148 aaKnown RBP14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 CDC123O75794 336 aaPredicted RBP14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 MLYCDO95822 493 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 BPGMP07738 259 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 ACPPP15309 386 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 ARRB2P32121 409 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 HTR6P50406 440 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 IRAK1BP1Q5VVH5 260 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 TRIM40Q6P9F5 258 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 CA13Q8N1Q1 262 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 REPS1Q96D71 796 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 FAR2Q96K12 515 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 ANAPC2Q9UJX6 822 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 ZNF451Q9Y4E5 1061 aa14.78□□□□□ -0.04
CLK3P2-201ENST00000427566 SMG1Q96Q15 3661 aaKnown RBP14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 CCT8L1PA6NM43 557 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 FOXE1O00358 373 aaPredicted RBP14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 MANBAO00462 879 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 CEACAM4O75871 244 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 ESRRBO95718 433 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 CHRNGP07510 517 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 SERPINB3P29508 390 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 SERPINB1P30740 379 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 SERPINB4P48594 390 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 AIMP2Q13155 320 aaKnown RBP14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 SCIMPQ6UWF3 145 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 CHSY3Q70JA7 882 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 OR11G2Q8NGC1 345 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 METTL6Q8TCB7 284 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 SELENOMQ8WWX9 145 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 METTL21AQ8WXB1 218 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 NACC2Q96BF6 587 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 ZNF717Q9BY31 904 aaPredicted RBP14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 MFRPQ9BY79 579 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 VN1R1Q9GZP7 353 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 ELOVL6Q9H5J4 265 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 ZNF160Q9HCG1 818 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 LANCL2Q9NS86 450 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 ADGRE2Q9UHX3 823 aa14.77□□□□□ -0.04
CLK3P2-201ENST00000427566 KALRNO60229 2985 aa14.77□□□□□ -0.05
CLK3P2-201ENST00000427566 NSG1A0A0A6YYJ2 146 aa14.76□□□□□ -0.05
CLK3P2-201ENST00000427566 J3QKU1 62 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms