RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 NADK2Q4G0N4 442 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 C10orf62Q5T681 223 aaPredicted RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 PAPD4Q6PIY7 484 aaKnown RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 ATG14Q6ZNE5 492 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 RIPOR1Q6ZS17 1223 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 SRRM1Q8IYB3 904 aaKnown RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 CCNYL1Q8N7R7 359 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 TMEM52Q8NDY8 209 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 ARMC2Q8NEN0 867 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 RDH11Q8TC12 318 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 BRIX1Q8TDN6 353 aaKnown RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 TM9SF4Q92544 642 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 APOPT1Q96IL0 206 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 ZNF382Q96SR6 550 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 SERPINI1Q99574 410 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 MAPKAP1Q9BPZ7 522 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 TMEM109Q9BVC6 243 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 MFRPQ9BY79 579 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 IQCGQ9H095 443 aaKnown RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 ZBTB20Q9HC78 741 aaPredicted RBP16.93■□□□□ 0.3
HERC3-205ENST00000426683 MKS1Q9NXB0 559 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 KCMF1Q9P0J7 381 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 ZNF225Q9UK10 706 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 PPT2Q9UMR5 302 aa16.93■□□□□ 0.3
HERC3-205ENST00000426683 IGKV3D-11A0A0A0MRZ8 115 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 TCRBV16S1A1N1A0A5B0 115 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 CYR61O00622 381 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 CLDN4O14493 209 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 MLYCDO95822 493 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 ITGAMP11215 1152 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 CPA3P15088 417 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 ARFIP1P53367 373 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 HSD17B7P56937 341 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 AP2B1P63010 937 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SLC13A2Q13183 592 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SLAMF1Q13291 335 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 BTBD16Q32M84 506 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 KRT71Q3SY84 523 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 FAM219BQ5XKK7 198 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 PLAG1Q6DJT9 500 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 GPRIN3Q6ZVF9 776 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SCUBE1Q8IWY4 988 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 ZNF595Q8IYB9 648 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SIRT6Q8N6T7 355 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 RBMXL3Q8N7X1 1067 aaKnown RBP16.92■□□□□ 0.3
HERC3-205ENST00000426683 CDYL2Q8N8U2 506 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 BANPQ8N9N5 519 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 MYRIPQ8NFW9 859 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SELENOMQ8WWX9 145 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 PSMF1Q92530 271 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 GSTO2Q9H4Y5 243 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 FARSBQ9NSD9 589 aaKnown RBP16.92■□□□□ 0.3
HERC3-205ENST00000426683 PTGFRNQ9P2B2 879 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 MID2Q9UJV3 735 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 FBXW2Q9UKT8 454 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SNX6Q9UNH7 406 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 STK38LQ9Y2H1 464 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 SPACA6W5XKT8 324 aa16.92■□□□□ 0.3
HERC3-205ENST00000426683 PDYNP01213 254 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 UQCRHP07919 91 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 CPN2P22792 545 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 BSGP35613 385 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 CASRP41180 1078 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 CD97P48960 835 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 LCP2Q13094 533 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 EXT1Q16394 746 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 CRB2Q5IJ48 1285 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 JMJD6Q6NYC1 403 aaPredicted RBP16.91■□□□□ 0.3
HERC3-205ENST00000426683 IGFL3Q6UXB1 125 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 ISLR2Q6UXK2 745 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 LINC00696Q6ZRV3 163 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 ZCCHC7Q8N3Z6 543 aaKnown RBP16.91■□□□□ 0.3
HERC3-205ENST00000426683 SMC6Q96SB8 1091 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 ZNF717Q9BY31 904 aaPredicted RBP16.91■□□□□ 0.3
HERC3-205ENST00000426683 EPS8L2Q9H6S3 715 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 OXSMQ9NWU1 459 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 PLLPQ9Y342 182 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 COL6A6A6NMZ7 2263 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
HERC3-205ENST00000426683 KALRNO60229 2985 aa16.91■□□□□ 0.3
HERC3-205ENST00000426683 A8MUA0 341 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 SPAG7O75391 227 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 EEDO75530 441 aaKnown RBP16.9■□□□□ 0.3
HERC3-205ENST00000426683 SEMA3DO95025 777 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 PLA2G2AP14555 144 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 NAGLUP54802 743 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 PKNOX1P55347 436 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 SLC26A5P58743 744 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 DNAJB13P59910 316 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 MFAP5Q13361 173 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 CFAP157Q5JU67 520 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 TCHHL1Q5QJ38 904 aaPredicted RBP16.9■□□□□ 0.3
HERC3-205ENST00000426683 NUDT13Q86X67 352 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 ZADH2Q8N4Q0 377 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 M1APQ8TC57 530 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 METTL6Q8TCB7 284 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms