RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 GTF3C1Q12789 2109 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 SLC13A2Q13183 592 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 E2F2Q14209 437 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 RCN2Q14257 317 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 TBCCQ15814 346 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 PAGE2BQ5JRK9 111 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 ABHD17CQ6PCB6 329 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 Q6ZPB1 254 aaPredicted RBP18.69■□□□□ 0.58
CCDC107-206ENST00000426546 LRRC70Q7Z2Q7 622 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.69■□□□□ 0.58
CCDC107-206ENST00000426546 CCDC25Q86WR0 208 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 ZNF227Q86WZ6 799 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 ZNF808Q8N4W9 903 aaPredicted RBP18.69■□□□□ 0.58
CCDC107-206ENST00000426546 PPM1NQ8N819 430 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 FAM47BQ8NA70 645 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 STAG3L4Q8TBR4 150 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 VMP1Q96GC9 406 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 CD244Q9BZW8 370 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 PNO1Q9NRX1 252 aaKnown RBP18.69■□□□□ 0.58
CCDC107-206ENST00000426546 SH3BGRL2Q9UJC5 107 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 DAPP1Q9UN19 280 aa18.69■□□□□ 0.58
CCDC107-206ENST00000426546 NPIPA5E9PKD4 350 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 TGFBR3LH3BV60 316 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 CYR61O00622 381 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ASNA1O43681 348 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 CCNT2O60583 730 aaKnown RBP18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ZNF24P17028 368 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 EPORP19235 508 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 TFEBP19484 476 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 CASP2P42575 452 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 MAGEA4P43358 317 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 KCNC1P48547 511 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 HNRNPFP52597 415 aaKnown RBP18.68■□□□□ 0.58
CCDC107-206ENST00000426546 LIM2P55344 173 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 IRF8Q02556 426 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 SLMAPQ14BN4 828 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 HIST2H2ACQ16777 129 aaPredicted RBP18.68■□□□□ 0.58
CCDC107-206ENST00000426546 HIST2H2AA3Q6FI13 130 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ADNP2Q6IQ32 1131 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 C8orf74Q6P047 294 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 TMEM52Q8NDY8 209 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 EXT2Q93063 718 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 KCNC2Q96PR1 638 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ROGDIQ9GZN7 287 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 TSPAN10Q9H1Z9 355 aaPredicted RBP18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ALG9Q9H6U8 611 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 RUBCNLQ9H714 662 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 NMRAL1Q9HBL8 299 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 ADAP2Q9NPF8 381 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 NUDT4Q9NZJ9 180 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 NPIPA1Q9UND3 350 aa18.68■□□□□ 0.58
CCDC107-206ENST00000426546 KLF13Q9Y2Y9 288 aaPredicted RBP18.68■□□□□ 0.58
CCDC107-206ENST00000426546 PCNX1Q96RV3 2341 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CSMD2Q7Z408 3487 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 FAM155BO75949 473 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CERS1P27544 350 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CRABP2P29373 138 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 GPR143P51810 404 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 PCDH1Q08174 1060 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CHIT1Q13231 466 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 ELAVL1Q15717 326 aaKnown RBP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 C3AR1Q16581 482 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 ZDHHC24Q6UX98 284 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 BNC2Q6ZN30 1099 aaPredicted RBP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 MRGPRGQ86SM5 289 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 TBC1D1Q86TI0 1168 aaPredicted RBP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 ISCA2Q86U28 154 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 SPPL2CQ8IUH8 684 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 GHDCQ8N2G8 530 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 POGLUT1Q8NBL1 392 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 SRFBP1Q8NEF9 429 aaKnown RBP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 FBF1Q8TES7 1133 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 UBTD2Q8WUN7 234 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 F2RL3Q96RI0 385 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 ATOH8Q96SQ7 321 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 CCDC77Q9BR77 488 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 TINAGQ9UJW2 476 aa18.67■□□□□ 0.58
CCDC107-206ENST00000426546 ZNF223Q9UK11 482 aaPredicted RBP18.67■□□□□ 0.58
CCDC107-206ENST00000426546 KERAO60938 352 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 ITGA10O75578 1167 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 LTA4HP09960 611 aaKnown RBP18.66■□□□□ 0.58
CCDC107-206ENST00000426546 PPP2R1BP30154 601 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 RIPPLY3P57055 190 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 DLG1Q12959 904 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 XKRXQ6PP77 449 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 CCDC91Q7Z6B0 441 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 CPSF7Q8N684 471 aaKnown RBP18.66■□□□□ 0.58
CCDC107-206ENST00000426546 LRRN4CLQ8ND94 238 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 UBE2E3Q969T4 207 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 NCLNQ969V3 563 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 CSF3RQ99062 836 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 TBCDQ9BTW9 1192 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 MS4A8Q9BY19 250 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 LYRM4Q9HD34 91 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 PRDM7Q9NQW5 492 aa18.66■□□□□ 0.58
CCDC107-206ENST00000426546 FBXW2Q9UKT8 454 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms