RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 OR56A3Q8NH54 315 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 ATL1Q8WXF7 558 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 NEIL2Q969S2 332 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 TSNARE1Q96NA8 513 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 OR4K3Q96R72 315 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 NDNQ99608 321 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 AIF1LQ9BQI0 150 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 SPNS1Q9H2V7 528 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 NEUROD4Q9HD90 331 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 CBLCQ9ULV8 474 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 DYRK1BQ9Y463 629 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 ACANP16112 2415 aa13.58□□□□□ -0.24
PDAP1-202ENST00000426447 ZCWPW2A0A1B0GU75 182 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 DVL2O14641 736 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 GUCA1CO95843 209 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SERPINA6P08185 405 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SMIM10L1P0DMW3 83 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 TNNI3P19429 210 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 BMP5P22003 454 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 CHSY3Q70JA7 882 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 CAND1Q86VP6 1230 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 RNF10Q8N5U6 811 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 ANKRD53Q8N9V6 530 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 NUDT8Q8WV74 236 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 RNASE6Q93091 150 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 LINGO1Q96FE5 620 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SMIM10Q96HG1 83 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SCYL1Q96KG9 808 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 SGCZQ96LD1 299 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 DESI2Q9BSY9 194 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 ADAP2Q9NPF8 381 aa13.57□□□□□ -0.24
PDAP1-202ENST00000426447 IARS2Q9NSE4 1012 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 MRPS33Q9Y291 106 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 PHF3Q92576 2039 aaKnown RBP13.57□□□□□ -0.24
PDAP1-202ENST00000426447 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 A0A0G2JN53 185 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 GOLGA8MH3BSY2 632 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 NRDCO43847 1150 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 HCN1O60741 890 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 ATE1O95260 518 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 ASCL1P50553 236 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 HK2P52789 917 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 AP1S2P56377 157 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 STXBP1P61764 594 aaKnown RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CCZ1BP86790 482 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 GPS1Q13098 491 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 RUNX2Q13950 521 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 ELAVL1Q15717 326 aaKnown RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 BBS9Q3SYG4 887 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 HSP90AA5PQ58FG0 334 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 OPN5Q6U736 354 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CLNKQ7Z7G1 428 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 SCUBE1Q8IWY4 988 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 GOLM1Q8NBJ4 401 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 MAIP1Q8WWC4 291 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 CCT6BQ92526 530 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 DAZLQ92904 295 aaKnown RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 NPLQ9BXD5 320 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 TUBA8Q9NY65 449 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 MTRF1LQ9UGC7 380 aaKnown RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 FOXD3Q9UJU5 478 aaPredicted RBP13.56□□□□□ -0.24
PDAP1-202ENST00000426447 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
PDAP1-202ENST00000426447 A0A088AWK7 358 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 MYOCOSA0A1B0GUC4 107 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 TUBAL3A6NHL2 446 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 FAM171A2A8MVW0 826 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 B3GALT2O43825 422 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 MLNP12872 115 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF10P21506 573 aaPredicted RBP13.55□□□□□ -0.24
PDAP1-202ENST00000426447 TACR1P25103 407 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 HOXC12P31275 282 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 RAB38P57729 211 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 IL2P60568 153 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 REEP5Q00765 189 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 STX4Q12846 297 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 HYAL4Q2M3T9 481 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 ANKRD22Q5VYY1 191 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 NXPE4Q6UWF7 544 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 TMPRSS11BQ86T26 416 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 THOC6Q86W42 341 aaKnown RBP13.55□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF595Q8IYB9 648 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 FBXW8Q8N3Y1 598 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 LIX1Q8N485 282 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 FAM47BQ8NA70 645 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 MORN4Q8NDC4 146 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 FBXL8Q96CD0 374 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 OR8D2Q9GZM6 311 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 PELI2Q9HAT8 420 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms