RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 DBIP07108 87 aaKnown RBP9.78□□□□□ -0.84
SP1-202ENST00000426431 PER3P56645 1201 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 UFM1P61960 85 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 HSF2Q03933 536 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 C5orf22Q49AR2 442 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 LYSMD4Q5XG99 296 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
SP1-202ENST00000426431 ALKAL1Q6UXT8 129 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PDZD3Q86UT5 571 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 MFSD6LQ8IWD5 586 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 A8MUA0 341 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 IDH3BO43837 385 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 SLITRK5O94991 958 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PABPC4LP0CB38 370 aaKnown RBP9.78□□□□□ -0.84
SP1-202ENST00000426431 EPCAMP16422 314 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 CD47Q08722 323 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 ANKRD33Q7Z3H0 272 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 LRRTM3Q86VH5 581 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 CHST4Q8NCG5 386 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 TOR1AIP2Q8NFQ8 470 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 SNRNP27Q8WVK2 155 aaKnown RBP9.78□□□□□ -0.84
SP1-202ENST00000426431 KAT2AQ92830 837 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PKP4Q99569 1192 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 ZFYVE21Q9BQ24 234 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 CST11Q9H112 138 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 CWH43Q9H720 699 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PHYHO14832 338 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 DCKP27707 260 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 SOX9P48436 509 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PLCXD2Q0VAA5 305 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 SLAMF1Q13291 335 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 ARL9Q6T311 187 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 SDR16C5Q8N3Y7 309 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 HSH2DQ96JZ2 352 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 HAPLN2Q9GZV7 340 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.78□□□□□ -0.84
SP1-202ENST00000426431 EHD1Q9H4M9 534 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 IL17CQ9P0M4 197 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 PRKAB1Q9Y478 270 aa9.78□□□□□ -0.84
SP1-202ENST00000426431 ZNF821O75541 412 aaPredicted RBP9.77□□□□□ -0.84
SP1-202ENST00000426431 EIF2B2P49770 351 aaKnown RBP9.77□□□□□ -0.84
SP1-202ENST00000426431 E2F2Q14209 437 aa9.77□□□□□ -0.84
SP1-202ENST00000426431 UGT3A2Q3SY77 523 aa9.77□□□□□ -0.84
SP1-202ENST00000426431 FIGLAQ6QHK4 219 aa9.77□□□□□ -0.84
SP1-202ENST00000426431 FTMTQ8N4E7 242 aa9.77□□□□□ -0.84
SP1-202ENST00000426431 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.84
SP1-202ENST00000426431 GFM1Q96RP9 751 aaKnown RBP9.77□□□□□ -0.84
SP1-202ENST00000426431 KIAA0355O15063 1070 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 PRAMEF2O60811 474 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 RBMXL2O75526 392 aaKnown RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 TRAPPC6AO75865 159 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 MMP2P08253 660 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 MSX2P35548 267 aaPredicted RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 GDF5P43026 501 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 NUP43Q8NFH3 380 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 C1orf216Q8TAB5 229 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 SLC45A3Q96JT2 553 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 APOOQ9BUR5 198 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 TMLHEQ9NVH6 421 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 AIG1Q9NVV5 245 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 POLR1CO15160 346 aaPredicted RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 MTRF1O75570 445 aaKnown RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 ZNF432O94892 652 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 FGF3P11487 239 aaPredicted RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 ACSL1P33121 698 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 CDKL1Q00532 357 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 NR0B2Q15466 257 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 SUSD1Q6UWL2 747 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 TM9SF4Q92544 642 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 FGF13Q92913 245 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 DTD2Q96FN9 168 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 MYRFLQ96LU7 910 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 MCHR1Q99705 422 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 ZNF559Q9BR84 538 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 COQ10BQ9H8M1 238 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 SLC7A8Q9UHI5 535 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 TSC22D2O75157 780 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 SLC35E2BP0CK96 405 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 ASB18Q6ZVZ8 466 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 KCT2Q8NC54 265 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 GRHL3Q8TE85 626 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 CXorf21Q9HAI6 301 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 PPP4R1LQ9P1A2 415 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 A0A0J9YY10 115 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 LSM3P62310 102 aaKnown RBP9.77□□□□□ -0.85
SP1-202ENST00000426431 FAM189BP81408 668 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 TDGQ13569 410 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 FGL2Q14314 439 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 CST9Q5W186 159 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 ARHGAP22Q7Z5H3 698 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 RNF130Q86XS8 419 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 TGM7Q96PF1 710 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 ORAI3Q9BRQ5 295 aa9.77□□□□□ -0.85
SP1-202ENST00000426431 RPF2Q9H7B2 306 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms