RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 PIGNO95427 931 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 BAG2O95816 211 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 PLGP00747 810 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 CDX1P47902 265 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 DVL1P1P54792 670 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 CDH11P55287 796 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 ILF2Q12905 390 aaKnown RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 TAF10Q12962 218 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 DMP1Q13316 513 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 DCAF10Q5QP82 559 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 PLPP4Q5VZY2 271 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 PLBD1Q6P4A8 553 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 SPSB3Q6PJ21 355 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 EXOC3L1Q86VI1 746 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 APCDD1Q8J025 514 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 CARNMT1Q8N4J0 409 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 MAPKAPK5-AS1Q8N8E1 139 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 NAT8LQ8N9F0 302 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 ST6GAL2Q96JF0 529 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 ZNF350Q9GZX5 532 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 TFB2MQ9H5Q4 396 aaKnown RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 SDR39U1Q9NRG7 319 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 DNAJC17Q9NVM6 304 aaKnown RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 VPS18Q9P253 973 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 STUB1Q9UNE7 303 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 MTF2Q9Y483 593 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 CACNA1FO60840 1977 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 POLQO75417 2590 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 GREB1Q4ZG55 1949 aa5.72□□□□□ -1.49
HMGB1P32-201ENST00000425971 SHROOM3Q8TF72 1996 aa5.71□□□□□ -1.49
HMGB1P32-201ENST00000425971 LOC101059948A0A1B0GTJ6 334 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 SNX3O60493 162 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 PRKRAO75569 313 aaKnown RBP5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 BAG3O95817 575 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 NR3C1P04150 777 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 EPORP19235 508 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 EFNA1P20827 205 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 VAMP7P51809 220 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 KLC1Q07866 573 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 SRSF5Q13243 272 aaKnown RBP5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 SMU1Q2TAY7 513 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZNF585BQ52M93 769 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 CCNYL2Q5T2Q4 361 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 CASC4Q6P4E1 433 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 BTNL8Q6UX41 500 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 C9orf139Q6ZV77 190 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 C10orf53Q8N6V4 93 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 AMER3Q8N944 861 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 GPATCH11Q8N954 259 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 SEPT1Q8WYJ6 367 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 PRMT8Q9NR22 394 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 FGF21Q9NSA1 209 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 NEUROG3Q9Y4Z2 214 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 MYH7BA7E2Y1 1941 aa5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 GREB1LQ9C091 1923 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P32-201ENST00000425971 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 O00370 1275 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 N4BP1O75113 896 aaKnown RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 SLC16A8O95907 504 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 TSHBP01222 138 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 C9P02748 559 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 TDGF1P13385 188 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 LIFP15018 202 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 ITIH1P19827 911 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 MARK3P27448 753 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 DCTP40126 519 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 HNF4AP41235 474 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 FRKP42685 505 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 SNU13P55769 128 aaKnown RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 TIMM10P62072 90 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 GABPAQ06546 454 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 RASGEF1BQ0VAM2 473 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 FHL1Q13642 323 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 PHKG1Q16816 387 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 TMEM179Q6ZVK1 233 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZNF771Q7L3S4 317 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 PHLDB2Q86SQ0 1253 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 RTN4RL2Q86UN3 420 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 LGI2Q8N0V4 545 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 NDUFAF2Q8N183 169 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 OR13A1Q8NGR1 328 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 OR52N5Q8NH56 324 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 CASP10Q92851 521 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 CD101Q93033 1021 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 CENPTQ96BT3 561 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 SNRNP40Q96DI7 357 aaKnown RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 MAP3K3Q99759 626 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 SNX25Q9H3E2 840 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 SLCO1C1Q9NYB5 712 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 FAF1Q9UNN5 650 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 RAD50Q92878 1312 aa5.7□□□□□ -1.5
HMGB1P32-201ENST00000425971 MGAQ8IWI9 3026 aa5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 COL6A6A6NMZ7 2263 aa5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 URB1O60287 2271 aaKnown RBP5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZFHX3Q15911 3703 aa5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 MYO5AQ9Y4I1 1855 aaKnown RBP5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 DENND3A2RUS2 1198 aa5.69□□□□□ -1.5
HMGB1P32-201ENST00000425971 LRRD1A4D1F6 860 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms