RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SMIM10Q96HG1 83 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ART5Q96L15 291 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ALOXE3Q9BYJ1 711 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TTTY12Q9BZ98 90 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CNOT10Q9H9A5 744 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCM2LQ9NUG4 571 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MTRF1LQ9UGC7 380 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PPIEQ9UNP9 301 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SH2B3Q9UQQ2 575 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 APCP25054 2843 aa11.4□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TRGV5A0A0B4J1U4 118 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ATP6AP2A0A1C7CYW4 349 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 WWP2O00308 870 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DNAJB6O75190 326 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ATP6AP2O75787 350 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 B3GALT4O96024 378 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 UQCRC1P31930 480 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MTTPP55157 894 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CDKL1Q00532 357 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LAPTM5Q13571 262 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CRYMQ14894 314 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PAGE2BQ5JRK9 111 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 C1orf185Q5T7R7 199 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ANKRD22Q5VYY1 191 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLC22A10Q63ZE4 541 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZNF662Q6ZS27 426 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KIF18BQ86Y91 864 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DND1Q8IYX4 353 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PDIK1LQ8N165 341 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TCAIMQ8N3R3 496 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MARVELD2Q8N4S9 558 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLC22A8Q8TCC7 542 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CERS2Q96G23 380 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OR4K3Q96R72 315 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RASL10BQ96S79 203 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OR8D2Q9GZM6 311 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 REXO4Q9GZR2 422 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RBSNQ9H1K0 784 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CLEC4MQ9H2X3 399 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NT5DC2Q9H857 520 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZDHHC11Q9H8X9 412 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CTNNAL1Q9UBT7 734 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 BOKQ9UMX3 212 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PCDHGB3Q9Y5G1 929 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 HRH3Q9Y5N1 445 aa11.39□□□□□ -0.59
HLA-DQB3-203ENST00000425319 A0A1B0GVC2 190 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CAPN14A8MX76 684 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CES2O00748 559 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CLEC3AO75596 197 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 WDR47O94967 919 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 IL2RAP01589 272 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 IGHG3P01860 377 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TLX1P31314 330 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SOX3P41225 446 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GPR143P51810 404 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PLA2G16P53816 162 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CDKN2DP55273 166 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TFF3Q07654 80 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZNF750Q32MQ0 723 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RIPPLY2Q5TAB7 128 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TRILQ7L0X0 811 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ADAMTSL2Q86TH1 951 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SCUBE1Q8IWY4 988 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FBXW8Q8N3Y1 598 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLC15A4Q8N697 577 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NAT8LQ8N9F0 302 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ANKRD53Q8N9V6 530 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OR2L5Q8NG80 312 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CENPKQ9BS16 269 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GPRC5BQ9NZH0 403 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 VTI1BQ9UEU0 232 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ASIC3Q9UHC3 531 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LRIT2A6NDA9 550 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SYT5O00445 386 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CTAG2O75638 210 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OR6B1O95007 311 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 S100BP04271 92 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 F7P08709 466 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GLI4P10075 376 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SERPINB3P29508 390 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PPP2R1BP30154 601 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MAGEA5P43359 124 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KCNC1P48547 511 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KCNJ2P63252 427 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RNF4P78317 190 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RUNX2Q13950 521 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KEAP1Q14145 624 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms