RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 CLEC18CQ8NCF0 446 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF483Q8TF39 744 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 CDK15Q96Q40 435 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 MAPKAP1Q9BPZ7 522 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 CCDC77Q9BR77 488 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF717Q9BY31 904 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 COPS7BQ9H9Q2 264 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ASF1BQ9NVP2 202 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 STMN3Q9NZ72 180 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 TBK1Q9UHD2 729 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 PPT2Q9UMR5 302 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 A0A1W2PPM1 405 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 SAGE2PA6NJ88 616 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 A8MUI8 341 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 FOXE1O00358 373 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 SAP18O00422 153 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PPP6CO00743 305 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 CLDN4O14493 209 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PLPP1O14494 284 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ETHE1O95571 254 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PYGBP11216 843 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PTX3P26022 381 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 NEK2P51955 445 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 CCNG1P51959 295 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ARG2P78540 354 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 DDX39BQ13838 428 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ACER2Q5QJU3 275 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ABHD17BQ5VST6 288 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 RPUSD3Q6P087 351 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 RPS27LQ71UM5 84 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ATCAYQ86WG3 371 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 FAM47BQ8NA70 645 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ARMC2Q8NEN0 867 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 UBLCP1Q8WVY7 318 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 RGMAQ96B86 450 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 REPS1Q96D71 796 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 CNDP1Q96KN2 507 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF354BQ96LW1 612 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 SORBS1Q9BX66 1292 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 KCNK13Q9HB14 408 aa16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PPIEQ9UNP9 301 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 PRRC2CQ9Y520 2896 aaKnown RBP16.76■□□□□ 0.27
IGHV3-47-201ENST00000425060 DYTNA2CJ06 578 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 GOLGA8RI6L899 631 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 MAN1A2O60476 641 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 DLX3O60479 287 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 CTNSO60931 367 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 VPS4BO75351 444 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 GSTA1P08263 222 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 BSGP35613 385 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 UQCRFS1P47985 274 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 GPR143P51810 404 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 SRSF1Q07955 248 aaKnown RBP eCLIP16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 CUL3Q13618 768 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 RCN2Q14257 317 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 RASA2Q15283 850 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 TERF2Q15554 542 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 GGTA1PQ4G0N0 100 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 FCRLBQ6BAA4 426 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 CYP4X1Q8N118 509 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZCCHC7Q8N3Z6 543 aaKnown RBP16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 KIF2BQ8N4N8 673 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 APCDD1LQ8NCL9 501 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 ATP6V1E2Q96A05 226 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 PPCSQ9HAB8 311 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 SEMA4BQ9NPR2 832 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 TEKT2Q9UIF3 430 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF225Q9UK10 706 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 VPS4AQ9UN37 437 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 MRPS33Q9Y291 106 aaKnown RBP16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 COPG1Q9Y678 874 aaKnown RBP16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 FLNCQ14315 2725 aa16.75■□□□□ 0.27
IGHV3-47-201ENST00000425060 OR5H15A6NDH6 313 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 A8MUA0 341 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 FOXO6A8MYZ6 492 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 TCP11X1B4DZS4 312 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 F10P00742 488 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 GNLYP22749 145 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 PPP2R1BP30154 601 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 HSD17B3P37058 310 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 SSR2P43308 183 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 CDH13P55290 713 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 VSNL1P62760 191 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 HERVK_113P63132 956 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 PHEXP78562 749 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF33BQ06732 778 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLC13A2Q13183 592 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 MEP1AQ16819 746 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 UNC50Q53HI1 259 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 MRM1Q6IN84 353 aaKnown RBP16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 LGI4Q8N135 537 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 ARMC10Q8N2F6 343 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 OR4F6Q8NGB9 312 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 OR1N1Q8NGS0 311 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 MAGEB10Q96LZ2 347 aaPredicted RBP16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 ERVK-6Q9BXR3 956 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 DDX31Q9H8H2 851 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms