RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 MCRIP2Q9BUT9 160 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMUB1Q9BVT8 246 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 NXF5Q9H1B4 397 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 LINC00597Q9H2U6 94 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FN3KQ9H479 309 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RIOX1Q9H6W3 641 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RMND5AQ9H871 391 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PCDH9Q9HC56 1237 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MAGEE1Q9HCI5 957 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 AVENQ9NQS1 362 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 IL17RBQ9NRM6 502 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FAM207AQ9NSI2 230 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 NOP53Q9NZM5 478 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 A0A087WUU8 490 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TRBV23-1A0A0A0MS06 115 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TRGV5A0A0B4J1U4 118 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 WDR1O75083 606 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PAGE1O75459 146 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CDC123O75794 336 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SNAPC5O75971 98 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LYPLA2O95372 231 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SERPINA3P01011 423 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PRB1P04280 392 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HNRNPCP07910 306 aaKnown RBP eCLIP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 UBTFL6P0CB48 400 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CHRNB1P11230 501 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KCNE1P15382 129 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CHRNA4P43681 627 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GPR6P46095 362 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC16A1P53985 500 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MAZP56270 477 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR2B6P58173 313 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RPS14P62263 151 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 BAMBIQ13145 260 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MSLNQ13421 630 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HES1Q14469 280 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 INPP5AQ14642 412 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MYBPC3Q14896 1274 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FAM27D1Q5T7N8 215 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM225Q6GV28 225 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ARSKQ6UWY0 536 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 Q71RC1 249 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SPATA19Q7Z5L4 167 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM69Q86WT6 500 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DDIASQ8IXT1 998 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LILRB4Q8NHJ6 448 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CPNE2Q96FN4 548 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC45A3Q96JT2 553 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZC3H10Q96K80 434 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 BMFQ96LC9 184 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR4C12Q96R67 309 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 REEP2Q9BRK0 252 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ASPNQ9BXN1 380 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TLR10Q9BXR5 811 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CCSER2Q9H7U1 834 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TCF7L1Q9HCS4 588 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DDX18Q9NVP1 670 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MS4A12Q9NXJ0 267 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DLL3Q9NYJ7 618 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ADAM21Q9UKJ8 722 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CLEC4AQ9UMR7 237 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MED12Q93074 2177 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SPTBN2O15020 2390 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM200CA6NKL6 621 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 EVPLLA8MZ36 301 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LMO7DNF2Z398 122 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 B4GALT5O43286 388 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PPP1R11O60927 126 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RGS9O75916 674 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 JCHAINP01591 159 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 BCKDHBP21953 392 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DNASE1L1P49184 302 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RARRES1P49788 294 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ARF3P61204 181 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZMYND11Q15326 602 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CCDC142Q17RM4 750 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LSM12Q3MHD2 195 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DHRS7BQ6IAN0 325 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RGS7BPQ6MZT1 257 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC39A4Q6P5W5 647 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 BTN2A1Q7KYR7 527 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMPRSS11BQ86T26 416 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NAGSQ8N159 534 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR7A2PQ8NGA2 310 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR51F2Q8NH61 342 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NANPQ8TBE9 248 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ADAMTS15Q8TE58 950 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZFP90Q8TF47 636 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PCED1BQ96HM7 432 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CELF6Q96J87 481 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FCRL2Q96LA5 508 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MRGPRX1Q96LB2 322 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLX1AQ9BQ83 275 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC46A2Q9BY10 475 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ADGRE2Q9UHX3 823 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SMIM23A6NLE4 172 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM114B3SHH9 223 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZMPSTE24O75844 475 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms