RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CAPS2Q9BXY5 557 aa14.21□□□□□ -0.13
USB1-202ENST00000423271 PITHD1Q9GZP4 211 aaPredicted RBP14.21□□□□□ -0.13
USB1-202ENST00000423271 REXO4Q9GZR2 422 aaKnown RBP14.21□□□□□ -0.13
USB1-202ENST00000423271 VPS11Q9H270 941 aa14.21□□□□□ -0.13
USB1-202ENST00000423271 FETUBQ9UGM5 382 aa14.21□□□□□ -0.13
USB1-202ENST00000423271 CLDN16Q9Y5I7 305 aa14.21□□□□□ -0.13
USB1-202ENST00000423271 ITPR2Q14571 2701 aa14.21□□□□□ -0.13
USB1-202ENST00000423271 CACNA1DQ01668 2161 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 ANKDD1BA6NHY2 528 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 SUPT3HB4E1H0 165 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 UBXN8O00124 270 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 ZG16O60844 167 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 SUPT3HO75486 399 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 NEURL1O76050 574 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 LTA4HP09960 611 aaKnown RBP14.2□□□□□ -0.14
USB1-202ENST00000423271 GSTM2P28161 218 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 TPP2P29144 1249 aaPredicted RBP14.2□□□□□ -0.14
USB1-202ENST00000423271 RAB38P57729 211 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 CHIT1Q13231 466 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 ABHD17CQ6PCB6 329 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 LGI4Q8N135 537 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 DNAJB8Q8NHS0 232 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 SEC16BQ96JE7 1060 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 F2RL3Q96RI0 385 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 CSF3RQ99062 836 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 EFCAB11Q9BUY7 163 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 NPLQ9BXD5 320 aaPredicted RBP14.2□□□□□ -0.14
USB1-202ENST00000423271 CD244Q9BZW8 370 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 NMRAL1Q9HBL8 299 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 NUDT4Q9NZJ9 180 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
USB1-202ENST00000423271 SEC14L3Q9UDX4 400 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 MMACHCQ9Y4U1 282 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 PCDHGB6Q9Y5F9 930 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 CELSR2Q9HCU4 2923 aa14.2□□□□□ -0.14
USB1-202ENST00000423271 B3GALT2O43825 422 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 KERAO60938 352 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 MYO1DO94832 1006 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 DCTP40126 519 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 SLCO1A2P46721 670 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 PER3P56645 1201 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 MLF1P58340 268 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 IRF8Q02556 426 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 TRIM40Q6P9F5 258 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 LRRC70Q7Z2Q7 622 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 GALNTL5Q7Z4T8 443 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 CCDC91Q7Z6B0 441 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 CLNKQ7Z7G1 428 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 PLD6Q8N2A8 252 aaKnown RBP14.19□□□□□ -0.14
USB1-202ENST00000423271 APCDD1LQ8NCL9 501 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 STAG3L4Q8TBR4 150 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 EPS8L3Q8TE67 593 aaKnown RBP14.19□□□□□ -0.14
USB1-202ENST00000423271 TSPAN10Q9H1Z9 355 aaPredicted RBP14.19□□□□□ -0.14
USB1-202ENST00000423271 PRTFDC1Q9NRG1 225 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 PNO1Q9NRX1 252 aaKnown RBP14.19□□□□□ -0.14
USB1-202ENST00000423271 LRFN1Q9P244 771 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 TBK1Q9UHD2 729 aa14.19□□□□□ -0.14
USB1-202ENST00000423271 ZNF223Q9UK11 482 aaPredicted RBP14.19□□□□□ -0.14
USB1-202ENST00000423271 PCNX1Q96RV3 2341 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 TRGV8A0A0C4DH27 118 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 TRBV11-1A0A0K0K1C0 115 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 A0A1B0GUH1 482 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 ASPDHA6ND91 283 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 SH3BGRLO75368 114 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 KLHL2O95198 593 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 CD46P15529 392 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 EEF1DP29692 281 aaKnown RBP14.18□□□□□ -0.14
USB1-202ENST00000423271 MTTPP55157 894 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 LIM2P55344 173 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 SLC13A2Q13183 592 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 E2F2Q14209 437 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 ZRSR2Q15696 482 aaKnown RBP14.18□□□□□ -0.14
USB1-202ENST00000423271 TBCCQ15814 346 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 FAM83EQ2M2I3 478 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 LGSNQ5TDP6 509 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 ZNF793Q6ZN11 406 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 UBE3DQ7Z6J8 389 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 ZNF227Q86WZ6 799 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 B3GNT7Q8NFL0 401 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 THAP3Q8WTV1 239 aaPredicted RBP14.18□□□□□ -0.14
USB1-202ENST00000423271 UBTD2Q8WUN7 234 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 RELTQ969Z4 430 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 MTBPQ96DY7 904 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 FRMD6Q96NE9 622 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 SERINC2Q96SA4 455 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 MS4A8Q9BY19 250 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 COPS7BQ9H9Q2 264 aaPredicted RBP14.18□□□□□ -0.14
USB1-202ENST00000423271 PRDM7Q9NQW5 492 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 ZNF358Q9NW07 568 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 SH3BGRL2Q9UJC5 107 aa14.18□□□□□ -0.14
USB1-202ENST00000423271 A0A088AWK7 358 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 IQANK1A0A1B0GTG1 560 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 MYOCOSA0A1B0GUC4 107 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 K7EPI3 171 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 RTCAO00442 366 aaKnown RBP14.17□□□□□ -0.14
USB1-202ENST00000423271 CYR61O00622 381 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 SLC25A12O75746 678 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms