RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 TRIM55Q9BYV6 548 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 SHCBP1LQ9BZQ2 653 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 ADNPQ9H2P0 1102 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 AHSPQ9NZD4 102 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 KCMF1Q9P0J7 381 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 C19orf25Q9UFG5 118 aaPredicted RBP17.5■□□□□ 0.39
DDR1-233ENST00000421124 MRPS33Q9Y291 106 aaKnown RBP17.5■□□□□ 0.39
DDR1-233ENST00000421124 SPACA6W5XKT8 324 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 CHD6Q8TD26 2715 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 DOCK10Q96BY6 2186 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 FAM208BQ5VWN6 2430 aa17.5■□□□□ 0.39
DDR1-233ENST00000421124 LOC102723996A0A087X1L8 192 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 ATXN7O15265 892 aaPredicted RBP17.49■□□□□ 0.39
DDR1-233ENST00000421124 BIRC5O15392 142 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 PRMT3O60678 531 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 DNAJB5O75953 348 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 DHRS4L1P0CG22 281 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 EEF1A2Q05639 463 aaKnown RBP17.49■□□□□ 0.39
DDR1-233ENST00000421124 SLAMF1Q13291 335 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 KCNAB2Q13303 367 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 ABRAXAS2Q15018 415 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 LANCL3Q6ZV70 420 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 NUDT13Q86X67 352 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
DDR1-233ENST00000421124 FAM47BQ8NA70 645 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 PKNOX2Q96KN3 472 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 MAPKAP1Q9BPZ7 522 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 MRPL1Q9BYD6 325 aaKnown RBP17.49■□□□□ 0.39
DDR1-233ENST00000421124 DDX31Q9H8H2 851 aaKnown RBP17.49■□□□□ 0.39
DDR1-233ENST00000421124 VIPAS39Q9H9C1 493 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 TNFRSF12AQ9NP84 129 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 ATP13A2Q9NQ11 1180 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 PRDM9Q9NQV7 894 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 MMACHCQ9Y4U1 282 aa17.49■□□□□ 0.39
DDR1-233ENST00000421124 IGHV1-45A0A0A0MS14 117 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 A0A0A6YYD5 115 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 NSG1A0A0A6YYJ2 146 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 TMEM120BA0PK00 339 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 SERTM1A2A2V5 107 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 WDR91A4D1P6 747 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 MKRN2OSH3BPM6 223 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CYR61O00622 381 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CLDN4O14493 209 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 EEDO75530 441 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 HPP00738 406 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CHRNGP07510 517 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 UROSP10746 265 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 COX6A1P12074 109 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 SERPINB5P36952 375 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CCL11P51671 97 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 BTG2P78543 158 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 GALNT1Q10472 559 aaPredicted RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 AIMP2Q13155 320 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 NSDHLQ15738 373 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CYP20A1Q6UW02 462 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 PAGE2Q7Z2X7 111 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CPEB2Q7Z5Q1 589 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 ANKRD37Q7Z713 158 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CUZD1Q86UP6 607 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 ZNF595Q8IYB9 648 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 METTL4Q8N3J2 472 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 ANKRD42Q8N9B4 389 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 EXD3Q8N9H8 876 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 LSM14AQ8ND56 463 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 PPP1R14CQ8TAE6 165 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 TSLPQ969D9 159 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 PTCHD1Q96NR3 888 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 CSF3RQ99062 836 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 ZNF700Q9H0M5 742 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 EML4Q9HC35 981 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 PRTFDC1Q9NRG1 225 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 RIC8BQ9NVN3 520 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 LYARQ9NX58 379 aaKnown RBP17.48■□□□□ 0.39
DDR1-233ENST00000421124 MS4A12Q9NXJ0 267 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 VPS29Q9UBQ0 182 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 PHF11Q9UIL8 331 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 TUBD1Q9UJT1 453 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 ADAM29Q9UKF5 820 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 FBXW2Q9UKT8 454 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 PIEZO2Q9H5I5 2752 aa17.48■□□□□ 0.39
DDR1-233ENST00000421124 MASP2O00187 686 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 MAOAP21397 527 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 CPN2P22792 545 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 SERPINB3P29508 390 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 HNRNPFP52597 415 aaKnown RBP17.47■□□□□ 0.39
DDR1-233ENST00000421124 HSD17B7P56937 341 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 LY6DQ14210 128 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 PCOLCEQ15113 449 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 ARL13AQ5H913 290 aaPredicted RBP17.47■□□□□ 0.39
DDR1-233ENST00000421124 HHATQ5VTY9 493 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 MRM1Q6IN84 353 aaKnown RBP17.47■□□□□ 0.39
DDR1-233ENST00000421124 SCIMPQ6UWF3 145 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 NDUFAF7Q7L592 441 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 GPR180Q86V85 440 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 EFCAB3Q8N7B9 438 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 TMEM52Q8NDY8 209 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 OR6Y1Q8NGX8 325 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 ARL8AQ96BM9 186 aa17.47■□□□□ 0.39
DDR1-233ENST00000421124 ACPTQ9BZG2 426 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms