RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 SBSNQ6UWP8 590 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 CDC20BQ86Y33 519 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 GPALPP1Q8IXQ4 340 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 PTPMT1Q8WUK0 201 aaPredicted RBP13.18□□□□□ -0.3
NFE4-201ENST00000420058 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
NFE4-201ENST00000420058 SLCO2A1Q92959 643 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 CLEC4MQ9H2X3 399 aaPredicted RBP13.18□□□□□ -0.3
NFE4-201ENST00000420058 PELI2Q9HAT8 420 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 IL1RL2Q9HB29 575 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 CSPG4Q6UVK1 2322 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 A0A0G2JN53 185 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 MYOCOSA0A1B0GUC4 107 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 FIGNL2A6NMB9 653 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SUSD5O60279 629 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 GUCA1CO95843 209 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
NFE4-201ENST00000420058 HK2P52789 917 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 PPP2R2AP63151 447 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 RBBP5Q15291 538 aaKnown RBP13.17□□□□□ -0.3
NFE4-201ENST00000420058 PPP1R3AQ16821 1122 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 NDUFAF5Q5TEU4 345 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 ADGRD1Q6QNK2 874 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 THOC6Q86W42 341 aaKnown RBP13.17□□□□□ -0.3
NFE4-201ENST00000420058 FAM109AQ8N4B1 249 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
NFE4-201ENST00000420058 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 ASB15Q8WXK1 588 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 MBD6Q96DN6 1003 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 MS4A6EQ96DS6 147 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 ALPK1Q96QP1 1244 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SMR3AQ99954 134 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 FAM173AQ9BQD7 235 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 TUBA8Q9NY65 449 aaPredicted RBP13.17□□□□□ -0.3
NFE4-201ENST00000420058 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 MAD1L1Q9Y6D9 718 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
NFE4-201ENST00000420058 STAB1Q9NY15 2570 aa13.17□□□□□ -0.3
NFE4-201ENST00000420058 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 URADA6NGE7 173 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 CCL3P10147 92 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 CXCR5P32302 372 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 KIR2DL3P43628 341 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 RAB38P57729 211 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 IL2P60568 153 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 CLNKQ7Z7G1 428 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 CNTN4Q8IWV2 1026 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 ATL1Q8WXF7 558 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 PDLIM5Q96HC4 596 aaKnown RBP13.16□□□□□ -0.3
NFE4-201ENST00000420058 CSF3RQ99062 836 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 AIF1LQ9BQI0 150 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 NPLQ9BXD5 320 aaPredicted RBP13.16□□□□□ -0.3
NFE4-201ENST00000420058 PROK2Q9HC23 129 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
NFE4-201ENST00000420058 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 ACAD8Q9UKU7 415 aa13.16□□□□□ -0.3
NFE4-201ENST00000420058 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 A6NNC1 897 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.3
NFE4-201ENST00000420058 ACOT7O00154 380 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 NRDCO43847 1150 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 PRAMEF4O60810 478 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 WDR1O75083 606 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 CCDC175P0C221 793 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 RFPL3SP0C7P2 107 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 DNASE1P24855 282 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 CCZ1BP86790 482 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
NFE4-201ENST00000420058 SLC13A2Q13183 592 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 CRYMQ14894 314 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
NFE4-201ENST00000420058 C18orf21Q32NC0 220 aaPredicted RBP13.15□□□□□ -0.3
NFE4-201ENST00000420058 ADPRMQ3LIE5 342 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 BBS9Q3SYG4 887 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 RIPPLY2Q5TAB7 128 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 PRAMEF9Q5VWM5 478 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 HSDL2Q6YN16 418 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 SLCO4C1Q6ZQN7 724 aa13.15□□□□□ -0.3
NFE4-201ENST00000420058 RTL4Q6ZR62 310 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms