RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GPRIN2O60269 458 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 HPP00738 406 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 PEX3P56589 373 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 RPS27AP62979 156 aaKnown RBP3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 ACY1Q03154 408 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 SCN1BQ07699 218 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 PSMD6Q15008 389 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 POM121L1PQ3SYA9 428 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF776Q68DI1 518 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 CASC4Q6P4E1 433 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 PET117Q6UWS5 81 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 GALNTL5Q7Z4T8 443 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 PHLDB2Q86SQ0 1253 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 TMEM99Q8N816 258 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 SEPT8Q92599 483 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 ALKBH3Q96Q83 286 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 HNRNPABQ99729 332 aaKnown RBP3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 CCM2Q9BSQ5 444 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 ACPTQ9BZG2 426 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 STRADBQ9C0K7 418 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 LIME1Q9H400 295 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF665Q9H7R5 613 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 NIP7Q9Y221 180 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 GTPBP10A4D1E9 387 aaKnown RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF724A8MTY0 619 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 IFIT3O14879 490 aaKnown RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 TBCAO75347 108 aaKnown RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 FGF19O95750 216 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 IGHG1P01857 330 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ACKR3P25106 362 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 OR1D2P34982 312 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 MAGEB1P43366 347 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 IER3P46695 156 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 TMEM64Q6YI46 380 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 CACUL1Q86Y37 369 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 KLHL7Q8IXQ5 586 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 RCHY1Q96PM5 261 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 CITED2Q99967 270 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF559Q9BR84 538 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 SRD5A3Q9H8P0 318 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPR173Q9NS66 373 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF107Q9UII5 783 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ETV7Q9Y603 341 aa3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF646O15015 1829 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P49-201ENST00000418882 IGLON5A6NGN9 336 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 FBP2O00757 339 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 HSP90AA1P07900 732 aaKnown RBP3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ODC1P11926 461 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 RBBP4Q09028 425 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 PEX6Q13608 980 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ECSCRQ19T08 205 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 TMEM44Q2T9K0 475 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 NHSL2Q5HYW2 709 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 AGAP7PQ5VUJ5 663 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 RFPL4BQ6ZWI9 263 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 NLRP14Q86W24 1093 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 MARCH9Q86YJ5 346 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZPLD1Q8TCW7 415 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ITLN1Q8WWA0 313 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 CKAP2Q8WWK9 683 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ERGIC2Q96RQ1 377 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 MLPHQ9BV36 600 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 TUFT1Q9NNX1 390 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 FAM212BQ9NTI7 297 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF446Q9NWS9 450 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 THYN1Q9P016 225 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 SPATA2Q9UM82 520 aa3.4□□□□□ -1.87
HMGB1P49-201ENST00000418882 IGLV3-10A0A075B6K4 115 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 A0A1B0GTH9 108 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 C2orf92A0A1B0GVN3 265 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 A4D1N5 150 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR5H15A6NDH6 313 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 WDR46O15213 610 aaKnown RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLU7O95391 586 aaKnown RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC16A8O95907 504 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 SOAT1P35610 550 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC1A4P43007 532 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 RIDAP52758 137 aaKnown RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 POU5F1Q01860 360 aaKnown RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 AKAP17AQ02040 695 aaKnown RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 BFSP1Q12934 665 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 RNF212Q495C1 297 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 RFTN2Q52LD8 501 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 MUC21Q5SSG8 566 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 C1QTNF12Q5T7M4 302 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 LYPLAL1Q5VWZ2 237 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 EMBQ6PCB8 327 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 OTOAQ7RTW8 1153 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF584Q8IVC4 421 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 C4orf19Q8IY42 314 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 BANPQ8N9N5 519 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR1B1Q8NGR6 318 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 C8orf46Q8TAG6 207 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 CCDC114Q96M63 670 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF581Q9P0T4 197 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 CDH7Q9ULB5 785 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms