RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ANGPTL6Q8NI99 470 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 CPPED1Q9BRF8 314 aaPredicted RBP11.23□□□□□ -0.61
DDR1-232ENST00000418800 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 TMEM184CQ9NVA4 438 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
DDR1-232ENST00000418800 LYRM1O43325 122 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 UGT2B17O75795 530 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 TALDO1P37837 337 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 DEFA5Q01523 94 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 MEF2AQ02078 507 aaPredicted RBP11.23□□□□□ -0.61
DDR1-232ENST00000418800 CACNG1Q06432 222 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 TUSC3Q13454 348 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 SYTL3Q4VX76 610 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 ATAT1Q5SQI0 421 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 SAXO2Q658L1 398 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 USP45Q70EL2 814 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 HDDC2Q7Z4H3 204 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 RAB8BQ92930 207 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 ISG20Q96AZ6 181 aaKnown RBP11.23□□□□□ -0.61
DDR1-232ENST00000418800 NANSQ9NR45 359 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 NPAP1Q9NZP6 1156 aa11.23□□□□□ -0.61
DDR1-232ENST00000418800 FAM220BPB1ANY3 271 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 TAPBPO15533 448 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 HPGDSO60760 199 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 TBL1XO60907 577 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 AOC2O75106 756 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SLC22A5O76082 557 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 TSPAN12O95859 305 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 APOC3P02656 99 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ATP5C1P36542 298 aaKnown RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 YBEYP58557 167 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SLC51BQ86UW2 128 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 COQ8AQ8NI60 647 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 MCCC1Q96RQ3 725 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 SDHCQ99643 169 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 C2orf49Q9BVC5 232 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 CLMPQ9H6B4 373 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 REV1Q9UBZ9 1251 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 ARID2Q68CP9 1835 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 GLYATL1P3A0A0U1RQE8 302 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ZNF197O14709 1029 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 WNT9AO14904 365 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ENTPD6O75354 484 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 GJB5O95377 273 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 TGFB1P01137 390 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ARSBP15848 533 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 CSTF2P33240 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDR1-232ENST00000418800 ZNF140P52738 457 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDR1-232ENST00000418800 TARDBPQ13148 414 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDR1-232ENST00000418800 PTGES3Q15185 160 aaKnown RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 PDZD3Q86UT5 571 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 KIF18BQ86Y91 864 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 APH1BQ8WW43 257 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ARMC5Q96C12 935 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SERHL2Q9H4I8 314 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 SERHLQ9NQF3 203 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 MIEF1Q9NQG6 463 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 NUP50Q9UKX7 468 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 RFXAPO00287 272 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 DHFRP00374 187 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 IFNA16P05015 189 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 PRR35P0CG20 571 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 DRD5P21918 477 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 CORO1AP31146 461 aaKnown RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 PTGER1P34995 402 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 CTBP2P56545 445 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 CLDN8P56748 225 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 RHAGQ02094 409 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 GRM7Q14831 915 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 P2RY14Q15391 338 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 IFI44LQ53G44 452 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 IDNKQ5T6J7 187 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 FRG2Q64ET8 278 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 ADNP2Q6IQ32 1131 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 FRG2BQ96QU4 278 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 MS4A7Q9GZW8 240 aaPredicted RBP11.22□□□□□ -0.61
DDR1-232ENST00000418800 ERVMER34-1Q9H9K5 563 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 GSTK1Q9Y2Q3 226 aa11.22□□□□□ -0.61
DDR1-232ENST00000418800 A0A0G2JN53 185 aa11.21□□□□□ -0.61
DDR1-232ENST00000418800 ACSL4O60488 711 aa11.21□□□□□ -0.61
DDR1-232ENST00000418800 KCNK5O95279 499 aa11.21□□□□□ -0.61
DDR1-232ENST00000418800 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
DDR1-232ENST00000418800 GGT2P36268 569 aa11.21□□□□□ -0.61
DDR1-232ENST00000418800 CPT1AP50416 773 aa11.21□□□□□ -0.61
DDR1-232ENST00000418800 LARS2Q15031 903 aaKnown RBP11.21□□□□□ -0.61
DDR1-232ENST00000418800 IL20RBQ6UXL0 311 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms