RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 GHITMQ9H3K2 345 aa7.69□□□□□ -1.18
HMGXB4-202ENST00000418170 IFT22Q9H7X7 185 aa7.69□□□□□ -1.18
HMGXB4-202ENST00000418170 RAI2Q9Y5P3 530 aa7.69□□□□□ -1.18
HMGXB4-202ENST00000418170 SNX11Q9Y5W9 270 aa7.69□□□□□ -1.18
HMGXB4-202ENST00000418170 SMIM30A4D0T7 59 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LOC730098B7Z3J9 87 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GTPBP1O00178 669 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HRO43593 1189 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PSIP1O75475 530 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GUCA1CO95843 209 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 WDPCPO95876 746 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HOXB3P14651 431 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PSMA3P25788 255 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 AQP1P29972 269 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PBX3P40426 434 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF81P51508 661 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SNRPGP62308 76 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PUDPQ08623 228 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TUSC1Q2TAM9 212 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 FRMPD2BQ6IN97 320 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 RASGRP3Q8IV61 690 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LINC00469Q8N7U9 141 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 OR52P1PQ8NH57 321 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 CEP76Q8TAP6 659 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PIH1D2Q8WWB5 315 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC9A6Q92581 669 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SCMH1Q96GD3 660 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC29A3Q9BZD2 475 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 RNF39Q9H2S5 420 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GLS2Q9UI32 602 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF222Q9UK12 451 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 KLF2Q9Y5W3 355 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 hCG_1807616A0A1W2PRN6 198 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HPGDSO60760 199 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 CFDP00746 253 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 NUDT7P0C024 238 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 OR56A5P0C7T3 313 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HLA-EP13747 358 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 RHOQP17081 205 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 CTPS1P17812 591 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TNFRSF1BP20333 461 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 NUP62P37198 522 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LHX1P48742 406 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 CRISP1P54107 249 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PLA1AQ53H76 456 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TMEM201Q5SNT2 666 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 NBPF12Q5TAG4 269 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 DNAJC5GQ8N7S2 189 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SRFBP1Q8NEF9 429 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 OR6C4Q8NGE1 309 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 OR6M1Q8NGM8 313 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TMEM203Q969S6 136 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 MTFMTQ96DP5 389 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 IL4I1Q96RQ9 567 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TRIB3Q96RU7 358 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 WACQ9BTA9 647 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LDAHQ9H6V9 325 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 KIF25Q9UIL4 384 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GMEB2Q9UKD1 530 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 MAB21L2Q9Y586 359 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 IQCF5A8MTL0 148 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LZTS3O60299 673 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SCN2BO60939 215 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GCM2O75603 506 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PCSK2P16519 638 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 ATP12AP54707 1039 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 IL10RBQ08334 325 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 BCL2L15Q5TBC7 163 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF57Q68EA5 555 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GLT6D1Q7Z4J2 308 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 LUZP2Q86TE4 346 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 MS4A15Q8N5U1 240 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 SYT14Q8NB59 555 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 HERVK_113Q902F9 699 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 RADILQ96JH8 1075 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 REG4Q9BYZ8 158 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 PRDM5Q9NQX1 630 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 TMEM248Q9NWD8 314 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 ACSL5Q9ULC5 683 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 DHRS7Q9Y394 339 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 GJA3Q9Y6H8 435 aa7.68□□□□□ -1.18
HMGXB4-202ENST00000418170 MOXD2PA6NHM9 499 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 PDYNP01213 254 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 PROS1P07225 676 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 F8A1P23610 371 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 PCGF2P35227 344 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 LIMS1P48059 325 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 WNT3P56703 355 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 TAF1AQ15573 450 aaPredicted RBP7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 MARCH8Q5T0T0 291 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 CD276Q5ZPR3 534 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 PAQR6Q6TCH4 344 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 DENND1CQ8IV53 801 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF683Q8IZ20 524 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC6A18Q96N87 628 aa7.67□□□□□ -1.18
HMGXB4-202ENST00000418170 TPT1P8Q9HAU6 139 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms