RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
VCP-202ENST00000417448 A0A1W2PQ72 361 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 TRBC2A0A5B9 178 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
VCP-202ENST00000417448 SMIM24O75264 130 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 SH3BGRLO75368 114 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 SPAG7O75391 227 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ITGAMP11215 1152 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 KRT4P19013 534 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 KLK2P20151 261 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 GRK3P35626 688 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 SCTRP47872 440 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ZNF844Q08AG5 666 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 LRRC70Q7Z2Q7 622 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 GOLGA7Q7Z5G4 137 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ASPGQ86U10 573 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 RNF175Q8N4F7 328 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ACMSDQ8TDX5 336 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 TM4SF19Q96DZ7 209 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 AIF1LQ9BQI0 150 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 KLHL31Q9H511 634 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ENAMQ9NRM1 1142 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 ZNF490Q9ULM2 529 aaPredicted RBP16.87■□□□□ 0.29
VCP-202ENST00000417448 ANGPTL3Q9Y5C1 460 aa16.87■□□□□ 0.29
VCP-202ENST00000417448 KCNE1BA0A087WTH5 132 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 IGHV1-45A0A0A0MS14 117 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 A8MT66 165 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 PPP6CO00743 305 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 ADAM10O14672 748 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 FOXS1O43638 330 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 DLX3O60479 287 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 H2AFYO75367 372 aaKnown RBP16.86■□□□□ 0.29
VCP-202ENST00000417448 IRF8Q02556 426 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 RELAQ04206 551 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 GTF2H2Q13888 395 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 SYT16Q17RD7 645 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 FAM214AQ32MH5 1076 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 GTF2H2CQ6P1K8 395 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 C3P1Q6ZMU1 363 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 ARHGEF39Q8N4T4 335 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 OR9A4Q8NGU2 314 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 SUN3Q8TAQ9 357 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 AGAP11Q8TF27 550 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 CCT6BQ92526 530 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 MIEF2Q96C03 454 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 AICDAQ9GZX7 198 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
VCP-202ENST00000417448 IGLV3-12A0A075B6K2 115 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 TMEM200CA6NKL6 621 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 FAM227AF5H4B4 570 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 NDUFS4O43181 175 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 DNAJB6O75190 326 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 WFS1O76024 890 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 UQCRHP07919 91 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 EPB42P16452 691 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 IL1RNP18510 177 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 PIK3CGP48736 1102 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 CDH13P55290 713 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 MAT1AQ00266 395 aaKnown RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 OCA2Q04671 838 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 PCBP2Q15366 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
VCP-202ENST00000417448 ZNF766Q5HY98 468 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 TRABD2AQ86V40 505 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 MYLK4Q86YV6 388 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 CHERPQ8IWX8 916 aaKnown RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.85■□□□□ 0.29
VCP-202ENST00000417448 CA5BP1Q8WTZ4 195 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 PHF10Q8WUB8 498 aaKnown RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 SDCCAG3Q96C92 435 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 CDK15Q96Q40 435 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 DMRTA2Q96SC8 542 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 YIPF2Q9BWQ6 316 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 PPCSQ9HAB8 311 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 ZNF304Q9HCX3 659 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 PRM3Q9NNZ6 103 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 NPDC1Q9NQX5 325 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 DLL4Q9NR61 685 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 GPRC5BQ9NZH0 403 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 ZNF282Q9UDV7 671 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 DCDC2Q9UHG0 476 aa16.85■□□□□ 0.29
VCP-202ENST00000417448 HRNRQ86YZ3 2850 aaPredicted RBP16.85■□□□□ 0.29
VCP-202ENST00000417448 A0A0G2JN53 185 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 ZNF860A6NHJ4 632 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 C4orf51C9J302 202 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 SGK494L7N484 410 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 COPEO14579 308 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 OR7A17O14581 309 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 PROCP04070 461 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 TUBBP07437 444 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 GSTA1P08263 222 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 SLC18A2Q05940 514 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 HYAL2Q12891 473 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 RASA2Q15283 850 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms