RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SAP18O00422 153 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 E2F3O00716 465 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 MYO1DO94832 1006 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 IFNA16P05015 189 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 TAC1P20366 129 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 HIST1H1TP22492 207 aaPredicted RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 ATP5A1P25705 553 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 PTX3P26022 381 aaPredicted RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 STX4Q12846 297 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 OR4C11Q6IEV9 310 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 H3F3CQ6NXT2 135 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 RPUSD3Q6P087 351 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 TIFABQ6ZNK6 161 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 RPS19BP1Q86WX3 136 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 CRLF3Q8IUI8 442 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 AMER2Q8N7J2 671 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 BCORP1Q8N888 145 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 ACOT4Q8N9L9 421 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 EIF1ADQ8N9N8 165 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 C7orf57Q8NEG2 295 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 PRR7Q8TB68 274 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 GRHL3Q8TE85 626 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 UBLCP1Q8WVY7 318 aaPredicted RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 MTERF1Q99551 399 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 UTP23Q9BRU9 249 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 DEFB126Q9BYW3 111 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 OR51B5Q9H339 312 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 NOL11Q9H8H0 719 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 LYRM4Q9HD34 91 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 PSMC3IPQ9P2W1 217 aaPredicted RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 RNF11Q9Y3C5 154 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 TSC22D4Q9Y3Q8 395 aa10.5□□□□□ -0.73
RFFL-204ENST00000414419 FLNBO75369 2602 aaKnown RBP10.5□□□□□ -0.73
RFFL-204ENST00000414419 BLACEA4D250 179 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 ANKUB1A6NFN9 424 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 RTCAO00442 366 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 CTNSO60931 367 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 AGFG2O95081 481 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 RASAL1O95294 804 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 TNNI3P19429 210 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CPN2P22792 545 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 TLX1P31314 330 aaPredicted RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 CLCN2P51788 898 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 RPS13P62277 151 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 OC90Q02509 493 aaPredicted RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 MRPL49Q13405 166 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 ZRSR2Q15696 482 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 INAQ16352 499 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 EIF2S3LQ2VIR3 472 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 UBE3DQ7Z6J8 389 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 MILR1Q7Z6M3 343 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CLNKQ7Z7G1 428 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 LCA5Q86VQ0 697 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 SCUBE1Q8IWY4 988 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 GSPT2Q8IYD1 628 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 BEST3Q8N1M1 668 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 TMEM132CQ8N3T6 1108 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 HORMAD2Q8N7B1 307 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 L3MBTL4Q8NA19 623 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 LRRN4CLQ8ND94 238 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 ELP5Q8TE02 316 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 FAR1Q8WVX9 515 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 MTFMTQ96DP5 389 aaKnown RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 CDK15Q96Q40 435 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CSF3RQ99062 836 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 MAPKAP1Q9BPZ7 522 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 ALOXE3Q9BYJ1 711 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CDCP1Q9H5V8 836 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 ADAP2Q9NPF8 381 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 SEMA4BQ9NPR2 832 aaPredicted RBP10.49□□□□□ -0.73
RFFL-204ENST00000414419 DMRT3Q9NQL9 472 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 OLAHQ9NV23 265 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 MS4A12Q9NXJ0 267 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 FETUBQ9UGM5 382 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 TBK1Q9UHD2 729 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 PCTPQ9UKL6 214 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 FBXW2Q9UKT8 454 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 NTNG1Q9Y2I2 539 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CLCA3PQ9Y6N3 262 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
RFFL-204ENST00000414419 CROCCQ5TZA2 2017 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 GABRR3A8MPY1 467 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 FOXE1O00358 373 aaPredicted RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 CYR61O00622 381 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 FCHO1O14526 889 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 OR7A17O14581 309 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 PRAMEF2O60811 474 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 CBX6O95503 412 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 CRYABP02511 175 aaKnown RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 CD46P15529 392 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 GCAP28676 217 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 HNRNPFP52597 415 aaKnown RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 ARFIP1P53367 373 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 IFT88Q13099 833 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 TUBA3CQ13748 450 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 SERTAD2Q14140 314 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms