RNA–Protein interactions for RNA: ENST00000412453.2

HMGA1P5-201, Transcript of high mobility group AT-hook 1 pseudogene 5, humanhuman

BASIC

Gene HMGA1P5, Length 271 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P5-201ENST00000412453 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 CRLF3Q8IUI8 442 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 BCORP1Q8N888 145 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 L3MBTL4Q8NA19 623 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 FAM47BQ8NA70 645 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 ST6GALNAC3Q8NDV1 305 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 HUS1BQ8NHY5 278 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 GRHL3Q8TE85 626 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 FAR1Q8WVX9 515 aa17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 MRPL46Q9H2W6 279 aaKnown RBP17.69■□□□□ 0.42
HMGA1P5-201ENST00000412453 ANKUB1A6NFN9 424 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 LRRC14BA6NHZ5 514 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 CYR61O00622 381 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 SIX3O95343 332 aaPredicted RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 TGFB1P01137 390 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 HIST1H1TP22492 207 aaPredicted RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 ATP5A1P25705 553 aaKnown RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 EEF1DP29692 281 aaKnown RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 SSR2P43308 183 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 SRSF1Q07955 248 aaKnown RBP eCLIP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 DDX39BQ13838 428 aaKnown RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 UBE3DQ7Z6J8 389 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 AMER2Q8N7J2 671 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 ACOT4Q8N9L9 421 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 NFAM1Q8NET5 270 aaPredicted RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 RGMAQ96B86 450 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 PHF21BQ96EK2 531 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 UTP23Q9BRU9 249 aaKnown RBP17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 TXLNGYQ9BZA5 131 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 DMRT3Q9NQL9 472 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 PSD3Q9NYI0 1048 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 PCDHGB6Q9Y5F9 930 aa17.68■□□□□ 0.42
HMGA1P5-201ENST00000412453 SVILO95425 2214 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 HIVEP3Q5T1R4 2406 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 IQANK1A0A1B0GTG1 560 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 CTNSO60931 367 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 AGFG2O95081 481 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 CLDN9O95484 217 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 F10P00742 488 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 EDN3P14138 238 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 PTX3P26022 381 aaPredicted RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 RAP1GDS1P52306 607 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 C10orf62Q5T681 223 aaPredicted RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 FCRLBQ6BAA4 426 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 OR4C11Q6IEV9 310 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 ZNF793Q6ZN11 406 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 RPS19BP1Q86WX3 136 aaKnown RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 HORMAD2Q8N7B1 307 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 B3GNT7Q8NFL0 401 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 CSF3RQ99062 836 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 CCDC77Q9BR77 488 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 NTMT1Q9BV86 223 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 OR51B5Q9H339 312 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 L2HGDHQ9H9P8 463 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 ADAP2Q9NPF8 381 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 PNO1Q9NRX1 252 aaKnown RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 OLAHQ9NV23 265 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 MS4A12Q9NXJ0 267 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 PPT2Q9UMR5 302 aa17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 PPIEQ9UNP9 301 aaKnown RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 SETXQ7Z333 2677 aaKnown RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 USP9XQ93008 2570 aaPredicted RBP17.67■□□□□ 0.42
HMGA1P5-201ENST00000412453 GABRR3A8MPY1 467 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 A8MUA0 341 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 FAM153BP0C7A2 387 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 GCAP28676 217 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 ARL1P40616 181 aaPredicted RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 CLCN2P51788 898 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 CCNG1P51959 295 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 HNRNPFP52597 415 aaKnown RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 TUBA3CQ13748 450 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 SERTAD2Q14140 314 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 SLC29A2Q14542 456 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 CPSF6Q16630 551 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 EIF2S3LQ2VIR3 472 aaKnown RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 FAM153CQ494X1 144 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 TUBA3EQ6PEY2 450 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 TMEM132CQ8N3T6 1108 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 TMEM52Q8NDY8 209 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 DNAJB8Q8NHS0 232 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 PRR7Q8TB68 274 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 MTERF1Q99551 399 aaKnown RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 NPAS2Q99743 824 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 DEFB126Q9BYW3 111 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 CDCP1Q9H5V8 836 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 NOL11Q9H8H0 719 aaKnown RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 PSMC3IPQ9P2W1 217 aaPredicted RBP17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 PCTPQ9UKL6 214 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 CLDN16Q9Y5I7 305 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 ZGRF1Q86YA3 2104 aa17.66■□□□□ 0.42
HMGA1P5-201ENST00000412453 POLEQ07864 2286 aa17.65■□□□□ 0.42
HMGA1P5-201ENST00000412453 FOXE1O00358 373 aaPredicted RBP17.65■□□□□ 0.42
HMGA1P5-201ENST00000412453 RTCAO00442 366 aaKnown RBP17.65■□□□□ 0.42
HMGA1P5-201ENST00000412453 FCHO1O14526 889 aa17.65■□□□□ 0.42
HMGA1P5-201ENST00000412453 SH3BGRLO75368 114 aa17.65■□□□□ 0.42
HMGA1P5-201ENST00000412453 MYO1DO94832 1006 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms