RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SLC5A10A0PJK1 596 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SUPT3HB4E1H0 165 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 TAF4O00268 1085 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 GSTA4O15217 222 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 VPS4BO75351 444 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 KRT8P05787 483 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 PRR35P0CG20 571 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 PDHA2P29803 388 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 DGKQP52824 942 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 IL1RL1Q01638 556 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 LCP2Q13094 533 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ZNF181Q2M3W8 571 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 PRAMEF14Q5SWL7 426 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SYT6Q5T7P8 510 aaPredicted RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CCBE1Q6UXH8 406 aaPredicted RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SYTL1Q8IYJ3 562 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 OR7G1Q8NGA0 311 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CCL4L1Q8NHW4 92 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ACTR8Q9H981 624 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ADGRE2Q9UHX3 823 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 PCDHB14Q9Y5E9 798 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 N6AMT1Q9Y5N5 214 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 EFCAB9A8MZ26 197 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CFIP05156 583 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CBSLP0DN79 551 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CD36P16671 472 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 JUNDP17535 347 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 AK4P27144 223 aaPredicted RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 CBSP35520 551 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SLC26A3P40879 764 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 BLKP51451 505 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ATP6AP1LQ52LC2 224 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 FNDC5Q8NAU1 212 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 PROX1Q92786 737 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 DERL2Q9GZP9 239 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 DCSTAMPQ9H295 470 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 WDR70Q9NW82 654 aa13.68□□□□□ -0.22
MINDY4-202ENST00000409881 APOBEC3BQ9UH17 382 aaKnown RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 TMEFF2Q9UIK5 374 aaPredicted RBP13.68□□□□□ -0.22
MINDY4-202ENST00000409881 TNRC6BQ9UPQ9 1833 aaKnown RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 NCF1BA6NI72 391 aaPredicted RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 AGAP5A6NIR3 686 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 NCF1CA8MVU1 366 aaPredicted RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 H3BM21 787 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 BTN3A1O00481 513 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 PRKD3O94806 890 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SLCO2B1O94956 709 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 CTSEP14091 401 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 NCF1P14598 390 aaPredicted RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 RYKP34925 604 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 DCTP40126 519 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 GBX1Q14549 363 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 LAPTM4AQ15012 233 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 PRSS48Q7RTY5 328 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ZFAND4Q86XD8 727 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 METTL4Q8N3J2 472 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SVOPLQ8N434 492 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 PYCR2Q96C36 320 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ZNF583Q96ND8 569 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 BRINP2Q9C0B6 783 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 KAT8Q9H7Z6 458 aaKnown RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 IKZF3Q9UKT9 509 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 FAM172BPA6NC97 362 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 CDC7O00311 574 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SSX4O60224 188 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 LCKP06239 509 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ALOX12P18054 663 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ACTR1BP42025 376 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ACTR1AP61163 376 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SLC35A2P78381 396 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ABRQ12979 859 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 C1orf61Q13536 156 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SLX4IPQ5VYV7 408 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 GDPD3Q7L5L3 318 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SYVN1Q86TM6 617 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 GATAD2AQ86YP4 633 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 EID3Q8N140 333 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 ATOH8Q96SQ7 321 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 TBCDQ9BTW9 1192 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 DDX28Q9NUL7 540 aaKnown RBP13.67□□□□□ -0.22
MINDY4-202ENST00000409881 RAB23Q9ULC3 237 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 UGT2A1Q9Y4X1 527 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 SNX11Q9Y5W9 270 aa13.67□□□□□ -0.22
MINDY4-202ENST00000409881 USP34Q70CQ2 3546 aa13.66□□□□□ -0.22
MINDY4-202ENST00000409881 PDZK1P1A8MUH7 402 aa13.66□□□□□ -0.22
MINDY4-202ENST00000409881 DFNA5O60443 496 aa13.66□□□□□ -0.22
MINDY4-202ENST00000409881 LRP4O75096 1905 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms