RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NUDT4Q9NZJ9 180 aa13.76□□□□□ -0.21
CBX3-203ENST00000409747 PTBP2Q9UKA9 531 aaKnown RBP13.76□□□□□ -0.21
CBX3-203ENST00000409747 DAPP1Q9UN19 280 aa13.76□□□□□ -0.21
CBX3-203ENST00000409747 MEMO1Q9Y316 297 aa13.76□□□□□ -0.21
CBX3-203ENST00000409747 SPACA6W5XKT8 324 aa13.76□□□□□ -0.21
CBX3-203ENST00000409747 PRRG2O14669 202 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 TFECO14948 347 aaPredicted RBP13.75□□□□□ -0.21
CBX3-203ENST00000409747 FANCGO15287 622 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 CCNT2O60583 730 aaKnown RBP13.75□□□□□ -0.21
CBX3-203ENST00000409747 ZFAND5O76080 213 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 CERS1P27544 350 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 SERPINB1P30740 379 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 SSR4P51571 173 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 LIM2P55344 173 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 NAB1Q13506 487 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 SLMAPQ14BN4 828 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 VN1R5Q7Z5H4 357 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 TBC1D1Q86TI0 1168 aaPredicted RBP13.75□□□□□ -0.21
CBX3-203ENST00000409747 ZNF227Q86WZ6 799 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 MCEMP1Q8IX19 187 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 DAZLQ92904 295 aaKnown RBP13.75□□□□□ -0.21
CBX3-203ENST00000409747 EXT2Q93063 718 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 NCLNQ969V3 563 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 CD244Q9BZW8 370 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 LYRM4Q9HD34 91 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
CBX3-203ENST00000409747 CLCA3PQ9Y6N3 262 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 CREBBPQ92793 2442 aa13.75□□□□□ -0.21
CBX3-203ENST00000409747 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 CTNSO60931 367 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 WISP2O76076 250 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 CRABP2P29373 138 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 MEOX1P50221 254 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 ADORA2A-AS1P86434 159 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 C2orf54Q08AI8 447 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 CHIT1Q13231 466 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 BMPR2Q13873 1038 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 OR14A16Q8NHC5 309 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 PHF10Q8WUB8 498 aaKnown RBP13.74□□□□□ -0.21
CBX3-203ENST00000409747 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 TBCDQ9BTW9 1192 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 NMRAL1Q9HBL8 299 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
CBX3-203ENST00000409747 ZNF490Q9ULM2 529 aaPredicted RBP13.74□□□□□ -0.21
CBX3-203ENST00000409747 APCP25054 2843 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CYR61O00622 381 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 TBX6O95947 436 aaPredicted RBP13.73□□□□□ -0.21
CBX3-203ENST00000409747 IFNA16P05015 189 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 COX6B1P14854 86 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
CBX3-203ENST00000409747 CASQ1P31415 396 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CASP2P42575 452 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 MSH2P43246 934 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
CBX3-203ENST00000409747 PLTPP55058 493 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 GPX6P59796 221 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 STX4Q12846 297 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 SERTAD2Q14140 314 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 TMEM35AQ53FP2 167 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 FBXO48Q5FWF7 155 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CLNKQ7Z7G1 428 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CCDC25Q86WR0 208 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 SULF2Q8IWU5 870 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PPM1NQ8N819 430 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 MORN4Q8NDC4 146 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 TMEM52Q8NDY8 209 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 AGAP11Q8TF27 550 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CSF3RQ99062 836 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 ALG9Q9H6U8 611 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 OPTCQ9UBM4 332 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 ZNF223Q9UK11 482 aaPredicted RBP13.73□□□□□ -0.21
CBX3-203ENST00000409747 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CLDN16Q9Y5I7 305 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 A8MVJ9 347 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 SUPT3HB4E1H0 165 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 E9PLN8 166 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 TGFBR3LH3BV60 316 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PEX1O43933 1283 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PRAMEF4O60810 478 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 KERAO60938 352 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 SUPT3HO75486 399 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CLDN14O95500 239 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 C1QAP02745 245 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 TUBB4AP04350 444 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PRF1P14222 555 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CD22P20273 847 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 MAGEA4P43358 317 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 GPR143P51810 404 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 E2F2Q14209 437 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 RNFT1Q5M7Z0 435 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PRAMEF9Q5VWM5 478 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 ADNP2Q6IQ32 1131 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 MED27Q6P2C8 311 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 HSDL2Q6YN16 418 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms