RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 A6NHS1 94 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 AIM2O14862 343 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 DSCR3O14972 297 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 BAG2O95816 211 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 CD1DP15813 335 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 MST1P26927 711 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 HTR1EP28566 365 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 ATP4BP51164 291 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 SQLEQ14534 574 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 ZNF678Q5SXM1 525 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 AFTPHQ6ULP2 937 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 BNC2Q6ZN30 1099 aaPredicted RBP12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 GDF7Q7Z4P5 450 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 MRGPRGQ86SM5 289 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 ISCA2Q86U28 154 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 KBTBD2Q8IY47 623 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 PRSS58Q8IYP2 241 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 OR4L1Q8NH43 312 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 RHEBL1Q8TAI7 183 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 ELMO1Q92556 727 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 NR4A3Q92570 626 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 DLG3Q92796 817 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 MIEF2Q96C03 454 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 RCN3Q96D15 328 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 CDKN2AIPNLQ96HQ2 116 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 IL17FQ96PD4 163 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 TCF12Q99081 682 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 TTC1Q99614 292 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 EFCAB1Q9HAE3 211 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 UTP6Q9NYH9 597 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 PTGFRNQ9P2B2 879 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 STOX2Q9P2F5 926 aaPredicted RBP12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 POLG2Q9UHN1 485 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 BCAP29Q9UHQ4 241 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 CCDC168Q8NDH2 2452 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 PCNX1Q96RV3 2341 aa12.04□□□□□ -0.48
CHRNA1-205ENST00000409542 TRGV8A0A0C4DH27 118 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 TMEM233B4DJY2 109 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 H7C0S8 307 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 CELA2AP08217 269 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 PKLRP30613 574 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 ARSFP54793 590 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 GRB7Q14451 532 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 SEMA3AQ14563 771 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 KIR2DS3Q14952 304 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 CDSNQ15517 529 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 ZNF630Q2M218 657 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 PIGGQ5H8A4 983 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 IRAK1BP1Q5VVH5 260 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 TMEM198Q66K66 360 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 GFRALQ6UXV0 394 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 LDB1Q86U70 411 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 VRK3Q8IV63 474 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 SLC26A7Q8TE54 656 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 PPP1R36Q96LQ0 422 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 NR1H4Q96RI1 486 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 ECSITQ9BQ95 431 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 ALG9Q9H6U8 611 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 RUBCNLQ9H714 662 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 SEMA3GQ9NS98 782 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 SH3BGRL2Q9UJC5 107 aa12.03□□□□□ -0.48
CHRNA1-205ENST00000409542 CCDC189A1A4V9 331 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 CCL21O00585 134 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 PEX1O43933 1283 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 NRP2O60462 931 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 AP2A2O94973 939 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 HPP00738 406 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 ZNF37AP17032 561 aaPredicted RBP12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 PTGER4P35408 488 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 SOX11P35716 441 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 TNFSF10P50591 281 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 NAA20P61599 178 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 HERVK_113P63132 956 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 ARG2P78540 354 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 UNC50Q53HI1 259 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 ATG9BQ674R7 924 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 FIGLAQ6QHK4 219 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 IZUMO2Q6UXV1 221 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 SIRT6Q8N6T7 355 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 BRIX1Q8TDN6 353 aaKnown RBP12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 PYDC1Q8WXC3 89 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 CCDC124Q96CT7 223 aaKnown RBP12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 ZNF285Q96NJ3 590 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 C19orf43Q9BQ61 176 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 ERVK-6Q9BXR3 956 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 WDR41Q9HAD4 459 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 TRAF6Q9Y4K3 522 aa12.02□□□□□ -0.48
CHRNA1-205ENST00000409542 H3BNX3 289 aa12.02□□□□□ -0.49
CHRNA1-205ENST00000409542 UBDO15205 165 aa12.02□□□□□ -0.49
CHRNA1-205ENST00000409542 OR1I1O60431 355 aa12.02□□□□□ -0.49
CHRNA1-205ENST00000409542 CTSVO60911 334 aa12.02□□□□□ -0.49
CHRNA1-205ENST00000409542 SKAP2O75563 359 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-205ENST00000409542 GSTM1P09488 218 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms